GLBIO-2021

This repository provides code for the GLBIO 2021 workshop (Link to website: https://maese005.wixsite.com/mysite) If you have any questions, please contact Danielle at maese005@umn.edu Pytorch example coming soon...

Note: It appears, sometimes, Github may have trouble viewing .ipynb files. You may recieve the message: "Sorry, something went wrong. Reload?" If this is the case, please see the links below!

Exercise 1 Link to Code

• Model Architecture: CNN (Keras/Tensorflow)
• Language: Python
• Data: X-ray Images
  • Covid-19 images
  • Pneumonia images

Exercise 2 Link to Code

• Model Architecture: CNN (Keras/Tensorflow)
• Language: Python
• Data: DNA sequences

Exercise 3 Link to Code

• Model Architecture: ANN (neuralnet)
• Language: R
• Data: Diabetes Dataset

Exercise 4 Link to Code

• Model Architecture: Logistic regression (implemented from scratch and via sklearn)
• Language: Python
• Data: Diabetes Dataset

Exercise 5 Link to Code

• Model Architecture: CNN (fastai)
• Language: Python
• Data: X-ray Images
  • Covid-19 images
  • Pneumonia images