- A Peephole Optimizer for Python
- Compiling Little Languages in Python
- Securing Your Collaborative Jupyter Notebooks in the Cloud using Container and Load Balancing Services
- Quasi-orthonormal Encoding for Machine Learning Applications
- MatLab vs. Python vs. R
- modernizing PHCpack through phcpy
- Bloscpack: a compressed lightweight serialization format for numerical data
- CATOS: Computer Aided Training/Observing System
- High-Content Digital Microscopy with Python
- PySTEMM: Executable Concept Modeling for K-12 STEM Learning
- Performance of Python runtimes on a non-numeric scientific code
- Computing an Optimal Control Policy for an Energy Storage
- JyNI – Using native CPython-Extensions in Jython
- SfePy - Write Your Own FE Application
- Mining online social networks with Python to study urban mobility
- PyFAI: a Python library for high performance azimuthal integration on GPU
- Wyrm, A Pythonic Toolbox for Brain-Computer Interfacing
- SPySort: Neuronal Spike Sorting with Python
- Using Python to Dive into Signalling Data with CellNOpt and BioServices
- Py3DFreeHandUS: a library for voxel-array reconstruction using Ultrasonography and attitude sensors
- SClib, a hack for straightforward embedded C functions in Python
- Predictive Modelling of Toxicity Resulting from Radiotherapy Treatments of Head and Neck Cancer
- pyFRET: A Python Library for Single Molecule Fluorescence Data Analysis
- Enhancing SfePy with Isogeometric Analysis
- A Python-based Post-processing Toolset For Seismic Analyses
- Numerical simulation of liver perfusion: from CT scans to FE model
- Temperature diagnostics of the solar atmosphere using SunPy
- Python vs. R: A Text Mining Approach for analyzing the Research Trends in Scopus Database
- Partial Pole Placement via Delay Action: A Python Software for Delayed Feedback Stabilizing Design
- Meta-analysis parameters computation: a Python approach to facilitate the crossing of experimental conditions
- ExoTiC-ISM: A Python package for marginalised exoplanet transit parameters across a grid of systematic instrument models
- MKLpy: a python-based framework for Multiple Kernel Learning
- ARC 3.0: An expanded Python toolbox for atomic physics calculations
- PyR@TE 3
- PyXtal FF: a Python Library for Automated Force Field Generation
- multivar horner: a python package for computing Horner factorisations of multivariate polynomials
- DyPy: A Python Library for Simulating Matrix-Form Games
- Automated Unit Test Generation for Python
- PyKEEN 1.0: A Python Library for Training and Evaluating Knowledge Graph Embeddings
- Biomedical and Clinical English Model Packages in the Stanza Python NLP Library
- Towards a Sustainable Microgrid on Alderney Island Using a Python-based Energy Planning Tool
- FitsGeo: Python package for PHITS geometry development
- PyMGRIT: A Python Package for the parallel-in-time method MGRIT
- SEDBYS: A python-based SED Builder for Young Stars
- Introducing students to research codes: A short course on solving partial differential equations in Python
- TAPsolver: A Python package for the simulation and analysis of TAP reactor experiments
- SPInS, a pipeline for massive stellar parameter inference: A public Python tool to age-date, weigh, size up stars, and more
- reval: a Python package to determine the best number of clusters with stability-based relative clustering validation
- A Python Library for Exploratory Data Analysis and Knowledge Discovery on Twitter Data
- TB2J: a python package for computing magnetic interaction parameters
- SimpleSBML: A Python package for creating, editing, and interrogating SBML models: Verison 2.0
- PySAD: A Streaming Anomaly Detection Framework in Python
- TorchKGE: Knowledge Graph embedding in Python and PyTorch
- Development of a computational software in Python, used to study the materials resistance in beams
- Atomic Data Assessment with PyNeb
- MicroAnalyzer: A Python Tool for Automated Bacterial Analysis with Fluorescence Microscopy
- munuSSM: A python package for the μ-from-ν Supersymmetric Standard Model
- BOML: A Modularized Bilevel Optimization Library in Python for Meta Learning
- Extendible and Efficient Python Framework for Solving Evolution Equations with Stabilized Discontinuous Galerkin Methods
- PyROQ: a Python-based Reduced Order Quadrature Building Code for Fast Gravitational Wave Inference
- EZFF: Python Library for Multi-Objective Parameterization and Uncertainty Quantification of Interatomic Forcefields for Molecular Dynamics
- Scipp: Scientific data handling with labeled multi-dimensional arrays for C++ and Python
- Fast fully-reproducible streamlined serial/parallel Monte Carlo/MCMC simulations and visualizations via ParaMonte::Python library
- DIETERpy: a Python framework for The Dispatch and Investment Evaluation Tool with Endogenous Renewables
- Pyg4ometry: a Python library for the creation of Monte Carlo radiation transport physical geometries
- TextAttack: Lessons learned in designing Python frameworks for NLP
- The Dusty Evolved Star Kit (DESK): A Python package for fitting the Spectral Energy Distribution of Evolved Stars
- PYMT5: multi-mode translation of natural language and PYTHON code with transformers
- Network Security using Python
- On the performance of the Python programming language for serial and parallel scientific computations
- A Primer on Python for Life Science Researchers
- Introducing Python Programming for Engineering Scholars
- A facility for creating Python extensions in C++
- A Python Based Production System for High Volume Electronic Publishing
- Parallel High Performance Bootstrapping in Python
- A Computational Framework for Plasmonic Nanobiosensing
- Cloudknot: A Python Library to Run your Existing Code on AWS Batch
- Expert RF Feature Extraction to Win the Army RCO AI Signal Classification Challenge
- Deep and Ensemble Learning to Win the Army RCO AI Signal Classification Challenge
- Keeping the Chandra Satellite Cool with Python
- Fitting Human Decision Making Models using Python
- Astrodata
- Will Millennials Ever Get Married?
- Accelerating the Advancement of Data Science Education
- A Technical Anatomy of SPM.Python, a Scalable, Parallel Version of Python
- Dynamic Social Network Modeling of Diffuse Subcellular Morphologies
- Functional Uncertainty Constrained by Law and Experiment
- pgmpy: Probabilistic Graphical Models using Python
- Total Recall: flmake and the Quest for Reproducibility
- Equity, Scalability, and Sustainability of Data Science Infrastructure
- Fluctuation X-ray Scattering real-time app
- Composable Multi-Threading and Multi-Processing for Numeric Libraries
- Divisi: Learning from Semantic Networks and Sparse SVD
- DMTCP: Bringing Checkpoint-Restart to Python
- Converting Python Virtual Machine Code to C
- Scientific Computing with SciPy for Undergraduate Physics Majors
- Multidimensional Data Exploration with Glue
- Generalized earthquake classification
- Theano: A CPU and GPU Math Compiler in Python
- Hyperopt: A Python Library for Optimizing the Hyperparameters of Machine Learning Algorithms
- SkData: Data Sets and Algorithm Evaluation Protocols in Python
- Analyzing Particle Systems for Machine Learning and Data Visualization with freud
- Using Python to Study Rotational Velocity Distributions of Hot Stars
- HOOMD-blue version 3.0 A Modern, Extensible, Flexible, Object-Oriented API for Molecular Simulations
- Fitting and Estimating Parameter Confidence Limits with Sherpa
- SPORCO: A Python package for standard and convolutional sparse representations
- cesium: Open-Source Platform for Time-Series Inference
- Python as a First Programming Language for Biomedical Scientists
- librosa: Audio and Music Signal Analysis in Python
- UConnRCMPy: Python-based data analysis for Rapid Compression Machines
- Crab: A Recommendation Engine Framework for Python
- The Econ-ARK and HARK: Open Source Tools for Computational Economics
- CAF Implementation on FPGA Using Python Tools
- PyEDA: Data Structures and Algorithms for Electronic Design Automation
- Developing a Graph Convolution-Based Analysis Pipeline for Multi-Modal Neuroimage Data: An Application to Parkinson’s Disease
- Storing Reproducible Results from Computational Experiments using Scientific Python Packages
- Python Tools for Reproducible Research on Hyperbolic Problems
- BCE: Berkeley's Common Scientific Compute Environment for Research and Education
- A High Performance Robot Vision Algorithm Implemented in Python
- Measuring rainshafts: Bringing Python to bear on remote sensing data
- Compyle: a Python package for parallel computing
- Scientific Data Analysis and Visualization with Python, VTK, and ParaView
- gpustats: GPU Library for Statistical Computing in Python
- Python's Role in VisIt
- Using the Global Arrays Toolkit to Reimplement NumPy for Distributed Computation
- Netlist Analysis and Transformations Using SpyDrNet
- datreant: persistent, Pythonic trees for heterogeneous data
- Creating a Real-Time Recommendation Engine using Modified K-Means Clustering and Remote Sensing Signature Matching Algorithms
- Comparison of machine learning methods applied to birdsong element classification
- Practical Applications of Astropy
- Vision Spreadsheet: An Environment for Computer Vision
- Unusual Relationships: Python and Weaver Birds
- Constructing scientific programs using SymPy
- EarthSim: Flexible Environmental Simulation Workflows Entirely Within Jupyter Notebooks
- Safe handling instructions for missing data
- Java vs. Python Coverage of Introductory Programming Concepts: A Textbook Analysis
- Text and data mining scientific articles with allofplos
- pyjanitor: A Cleaner API for Cleaning Data
- Evolutionary Prototyping: "Add Later" Static Types for Python
- Automating Quantitative Confocal Microscopy Analysis
- Weather Forecast Accuracy Analysis
- Detection and characterization of interactions of genetic risk factors in disease
- Exploring Network Structure, Dynamics, and Function using NetworkX
- Interval Arithmetic: Python Implementation and Applications
- Experiences Using SciPy for Computer Vision Research
- The SciPy Documentation Project (Technical Overview)
- Matplotlib Solves the Riddle of the Sphinx
- The SciPy Documentation Project
- Pysynphot: A Python Re-Implementation of a Legacy App in Astronomy
- How the Large Synoptic Survey Telescope (LSST) is using Python
- Realtime Astronomical Time-series Classification and Broadcast Pipeline
- Analysis and Visualization of Multi-Scale Astrophysical Simulations Using Python and NumPy
- Mayavi: Making 3D Data Visualization Reusable
- Finite Element Modeling of Contact and Impact Problems Using Python
- Circuitscape: A Tool for Landscape Ecology
- Summarizing Complexity in High Dimensional Spaces
- Converting Python Functions to Dynamically Compiled C
- unPython: Converting Python Numerical Programs into C
- Cython tutorial
- Fast numerical computations with Cython
- High-Performance Code Generation Using CorePy
- Convert-XY: type-safe interchange of C++ and Python containers for NumPy extensions
- Parallel Kernels: An Architecture for Distributed Parallel Computing
- PaPy: Parallel and distributed data-processing pipelines in Python
- PMI - Parallel Method Invocation
- Sherpa: 1D/2D modeling and fitting in Python
- The FEMhub Project and Classroom Teaching of Numerical Methods
- Exploring the future of bioinformatics data sharing and mining with Pygr and Worldbase
- Nitime: time-series analysis for neuroimaging data
- Multiprocess System for Virtual Instruments in Python
- Neutron-scattering data acquisition and experiment automation with Python
- Progress Report: NumPy and SciPy Documentation in 2009
- The State of SciPy
- Python as a Discrete Event Simulation environment
- Codebraid: Live Code in Pandoc Markdown
- Introduction to Geometric Learning in Python with Geomstats
- Network visualizations with Pyvis and VisJS
- Rebuilding the Hubble Exposure Time Calculator
- Pythran: Enabling Static Optimization of Scientific Python Programs
- Using Python with Smoke and JWST Mirrors
- Sparse: A more modern sparse array library
- Adapted G-mode Clustering Method applied to Asteroid Taxonomy
- Modeling Sudoku Puzzles with Python
- Boost-histogram: High-Performance Histograms as Objects
- Case study: Real-world machine learning application for hardware failure detection
- LabbookDB: A Wet-Work-Tracking Database Application Framework
- The James Webb Space Telescope Data Calibration Pipeline
- Circumventing The Linker: Using SciPy's BLAS and LAPACK Within Cython
- Is Python an Appropriate Programming Language for Teaching Programming in Secondary Schools?
- Python – The Fastest Growing Programming Language
- Self-driving Lego Mindstorms Robot
- Bitmap Indices for Data Warehouses
- PyModel: Model-based testing in Python
- The Reference Model for Disease Progression
- Fcm - A python library for flow cytometry
- Learning from evolving data streams
- Mesa: An Agent-Based Modeling Framework
- PyHRF: A Python Library for the Analysis of fMRI Data Based on Local Estimation of the Hemodynamic Response Function
- Solving Polynomial Systems with phcpy
- HoloViews: Building Complex Visualizations Easily for Reproducible Science
- Ginga: an open-source astronomical image viewer and toolkit
- AI Based Voice Assistant Using Python
- Awkward Array: JSON-like data, NumPy-like idioms
- Bringing ipywidgets Support to plotly.py
- MONTE Python for Deep Space Navigation
- Structural Cohesion: Visualization and Heuristics for Fast Computation with NetworkX and matplotlib
- SciSheets: Providing the Power of Programming With The Simplicity of Spreadsheets
- Automated Image Quality Monitoring with IQMon
- The Climate Modelling Toolkit
- Beyond: A Portable Virtual World Simulation Framework
- Tell Me Something I Don't Know: Analyzing OkCupid Profiles
- PyRK: A Python Package For Nuclear Reactor Kinetics
- Teaching numerical methods with IPython notebooks and inquiry-based learning
- The Sacred Infrastructure for Computational Research
- Project-based introduction to scientific computing for physics majors
- Hyperopt-Sklearn: Automatic Hyperparameter Configuration for Scikit-Learn
- Automation of Inertial Fusion Target Design with Python
- Exploring Collaborative HPC Visualization Workflows using VisIt and Python
- Python Coding of Geospatial Processing in Web-based Mapping Applications
- PyTeCK: a Python-based automatic testing package for chemical kinetic models
- WrightSim: Using PyCUDA to Simulate Multidimensional Spectra
- Python Vuh: Mayan Calendrical Mathematics with Python
- Scaling Polygon Adjacency Algorithms to Big Data Geospatial Analysis
- Optimizing Python-Based Spectroscopic Data Processing on NERSC Supercomputers
- Hurricane Prediction with Python
- High-performance operator evaluations with ease of use: libCEED's Python interface
- FigureFirst: A Layout-first Approach for Scientific Figures
- IMUSim - Simulating inertial and magnetic sensor systems in Python
- VisPy: Harnessing The GPU For Fast, High-Level Visualization
- Python Machine Learning Projects
- Parallel Analysis in MDAnalysis using the Dask Parallel Computing Library
- Mailman – An Extensible Mailing List Manager Using Python
- Using Python to Construct a Scalable Parallel Nonlinear Wave Solver
- MatchPy: A Pattern Matching Library
- Spectral Analysis of Mitochondrial Dynamics: A Graph-Theoretic Approach to Understanding Subcellular Pathology
- White Noise Test: detecting autocorrelation and nonstationarities in long time series after ARIMA modeling
- A Real-Time 3D Audio Simulator for Cognitive Hearing Science
- Matched Filter Mismatch Losses in MPSK and MQAM Using Semi-Analytic BEP Modeling
- Exploring the Extended Kalman Filter for GPS Positioning Using Simulated User and Satellite Track Data
- Real-Time Digital Signal Processing Using pyaudio_helper and the ipywidgets
- pyDEM: Global Digital Elevation Model Analysis
- Widgets and Astropy: Accomplishing Productive Research with Undergraduates
- Dask: Parallel Computation with Blocked algorithms and Task Scheduling
- Organic Molecules in Space: Insights from the NASA Ames Molecular Database in the era of the James Webb Space Telescope
- Having your cake and eating it: Exploiting Python for programmer productivity and performance on micro-core architectures using ePython
- Building a Framework for Predictive Science
- Data Structures for Statistical Computing in Python
- Protein Folding with Python on Supercomputers
- PySPLIT: a Package for the Generation, Analysis, and Visualization of HYSPLIT Air Parcel Trajectories
- TrendVis: an Elegant Interface for dense, sparkline-like, quantitative visualizations of multiple series using matplotlib
- pulse2percept: A Python-based simulation framework for bionic vision
- Optimised finite difference computation from symbolic equations
- Causal Bayesian NetworkX
- Linting science prose and the science of prose linting
- SpacePy - A Python-based Library of Tools for the Space Sciences
- Campaign for IT literacy through FOSS and Spoken Tutorials
- SunPy: Python for Solar Physicists
- Harnessing the Power of Scientific Python to Investigate Biogeochemistry and Metaproteomes of the Central Pacific Ocean
- An intelligent shopping list based on the application of partitioning and machine learning algorithms
- Python meets systems neuroscience: affordable, scalable and open-source electrophysiology in awake, behaving rodents
- Python: a programming language for software integration and development
- PyStream: Compiling Python onto the GPU
- Geodynamic simulations in HPC with Python
- pandera: Statistical Data Validation of Pandas Dataframes
- Accelerating Scientific Python with Intel Optimizations
- MDAnalysis: A Python Package for the Rapid Analysis of Molecular Dynamics Simulations
- Combining Physics-Based and Data-Driven Modeling for Pressure Prediction in Well Construction
- Numerical Pyromaniacs: The Use of Python in Fire Research
- Validating Function Arguments in Python Signal Processing Applications
- Parameter Estimation Using the Python Package pymcmcstat
- Scikit-learn: Machine Learning in Python
- Reproducible Documents with PythonTeX
- Spreading the Adoption of Python in India: the FOSSEE Python Project
- PySPH: a reproducible and high-performance framework for smoothed particle hydrodynamics
- Binder 2.0 - Reproducible, interactive, sharable environments for science at scale
- Python for research and teaching economics
- Pydra - a flexible and lightweight dataflow engine for scientific analyses
- PyFront: Conversion of Python to C Extension Modules
- PyLZJD: An Easy to Use Tool for Machine Learning
- Python for Unified Research in Econometrics and Statistics
- Qiita: report of progress towards an open access microbiome data analysis and visualization platform
- A Programmatic Interface for Particle Plasma Simulation in Python
- Parkinson's Classification and Feature Extraction from Diffusion Tensor Images
- Leading magnetic fusion energy science into the big-and-fast data lane
- PySPH: A Python Framework for Smoothed Particle Hydrodynamics
- Python in Data Science Research and Education
- Audio-Visual Speech Recognition using SciPy
- lpEdit: an editor to facilitate reproducible analysis via literate programming
- PyDDA: A new Pythonic Wind Retrieval Package
- QuTiP: A framework for the dynamics of open quantum systems using SciPy and Cython
- SHADOW: A workflow scheduling algorithm reference and testing framework
- Validated numerics with Python: the ValidiPy package
- Creating a browser-based virtual computer lab for classroom instruction
- Relation: The Missing Container
- Better and faster hyperparameter optimization with Dask
- Statsmodels: Econometric and Statistical Modeling with Python
- Software Engineering as Research Method: Aligning Roles in Econ-ARK
- Visualizing physiological signals in real-time
- Spatio-temporal analysis of socioeconomic neighborhoods: The Open Source Longitudinal Neighborhood Analysis Package (OSLNAP)
- Visualization of Bioinformatics Data with Dash Bio
- Bringing Parallel Performance to Python with Domain-Specific Selective Embedded Just-in-Time Specialization
- PMDA - Parallel Molecular Dynamics Analysis
- cphVB: A System for Automated Runtime Optimization and Parallelization of Vectorized Applications
- N-th-order Accurate, Distributed Interpolation Library
- Implementing the SMS server, or why I switched from Tcl to Python
- Google App Engine Python
- Statistics and Machine Learning in Python
- TracPy: Wrapping the Fortran Lagrangian trajectory model TRACMASS
- OpenMG: A New Multigrid Implementation in Python
- Design and Implementation of pyPRISM: A Polymer Liquid-State Theory Framework
- Improving efficiency and repeatability of lake volume estimates using Python
- Modeling the Earth with Fatiando a Terra
- A Bayesian's journey to a better research workflow
- Frequentism and Bayesianism: A Python-driven Primer
- Scalable Feature Extraction with Aerial and Satellite Imagery
- Virtual Method Tables in Python
- signac: A Python framework for data and workflow management
- Blaze: Building A Foundation for Array-Oriented Computing in Python
- ChiantiPy: a Python package for Astrophysical Spectroscopy
- Yaksh: Facilitating Learning by Doing
- Building a Cloud Service for Reproducible Simulation Management
- Launching Python Applications on Peta-scale Massively Parallel Systems
- Falsify your Software: validating scientific code with property-based testing
- Towards an Unsupervised Spatiotemporal Representation of Cilia Video Using A Modular Generative Pipeline
- Simulating X-ray Observations with Python
- Time Series Analysis in Python with statsmodels