Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
mansikath committed Nov 26, 2023
1 parent 586dccb commit 9331e08
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@

#### Downloading Data
### Use wget to download data from SRA.
```bash
wget https://sra-pub-run-odp.s3.amazonaws.com/sra/SRR26624132/SRR26624132
#### Use fastq-dump to convert SRA to fastq
./sratoolkit.3.0.7-mac64/bin/fastq-dump --split-files SRR26624132
Expand Down Expand Up @@ -42,3 +43,4 @@ cut -f 2 blast_result.txt | sort | uniq | head -n 10 > top_gene_ids.txt
### Annotate genes using UniProt and PANTHER databases.
#### Add the Gene List to PANTHER for Annotation
#### Visit the PANTHER website (https://www.pantherdb.org/) and upload the gene list for functional annotation.
```

0 comments on commit 9331e08

Please sign in to comment.