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self-organising map of RNA-seq data from developing zebrafish cardiomyocytes

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mapawlak/zebraCardioSOM

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zebraCardioSOM

Self-organising maps of RNA-seq data of developing zebrafish cardiomyocytes (Pawlak et al. Genome Research, 2019). oposSOM R package was used to analise rld-normalized gene counts (DESeq2).

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neg - negative samples (no GFP signal) pos - positive samples (GFP signal)

Samples are from wt unless indicated as gata5, tbx5 or hand2 (these are TFs double KO).

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self-organising map of RNA-seq data from developing zebrafish cardiomyocytes

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