Selenoprofiles is a pipeline for profile-based protein finding in genomes. It is suitable also (but not only) for selenoproteins
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CHANGES.txt
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MMlib.py
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blaster_parser.g
install_selenoprofiles.py
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selenoprofiles_3.py
selenoprofiles_build_profile.py
selenoprofiles_database.py
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test_selenoprofiles.py
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README

# selenoprofiles

Selenoprofiles is a pipeline for profile-based protein finding in genomes. It runs internally blast, exonerate and genewise. It is suitable also (but not only) for prediction of selenoproteins. See page: http://big.crg.cat/services/selenoprofiles

For installation instructions, please run:      python install_selenoprofiles.py --help

Citation:
Mariotti M, Guigó R (2010) Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes. Bioinformatics. 26(21):2656-63. 

Santesmasses D, Mariotti M, Guigó R (2018) Selenoprofiles: A Computational Pipeline for Annotation of Selenoproteins. Methods Mol Biol. 1661:17-28.