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I have encountered an issue while trying to use the molfile_to_params.py script from the ASiteesign tool. Despite correctly installing and testing the tool with provided examples, I encountered errors when attempting to generate parameter files using molfile_to_params.py.
Error Message:
bash parm.sh
Traceback (most recent call last):
File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main
"main", fname, loader, pkg_name)
File "/usr/lib/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File "/media/mostafa/DATA/Project/project_bin/bin/AsiteDesign/7wab_second_flexpep/molfile_to_params.py", line 26, in
from rosetta_py.io.mdl_molfile import *
ImportError: No module named rosetta_py.io.mdl_molfile
python2 molfile_to_params.py
Traceback (most recent call last):
File "molfile_to_params.py", line 26, in
from rosetta_py.io.mdl_molfile import *
ImportError: No module named rosetta_py.io.mdl_molfile
python3 molfile_to_params.py
File "molfile_to_params.py", line 171
print "WARNING: atom %s has valence > 4" % atom.name
^
SyntaxError: Missing parentheses in call to 'print'. Did you mean print("WARNING: atom %s has valence > 4" % atom.name)?
I have tried running the script with both Python 2 and Python 3, but encountered different errors as outlined above.
Any assistance or guidance on resolving this issue would be greatly appreciated.
The text was updated successfully, but these errors were encountered:
I have encountered an issue while trying to use the molfile_to_params.py script from the ASiteesign tool. Despite correctly installing and testing the tool with provided examples, I encountered errors when attempting to generate parameter files using molfile_to_params.py.
Error Message:
bash parm.sh
Traceback (most recent call last):
File "/usr/lib/python2.7/runpy.py", line 174, in _run_module_as_main
"main", fname, loader, pkg_name)
File "/usr/lib/python2.7/runpy.py", line 72, in _run_code
exec code in run_globals
File "/media/mostafa/DATA/Project/project_bin/bin/AsiteDesign/7wab_second_flexpep/molfile_to_params.py", line 26, in
from rosetta_py.io.mdl_molfile import *
ImportError: No module named rosetta_py.io.mdl_molfile
python2 molfile_to_params.py
Traceback (most recent call last):
File "molfile_to_params.py", line 26, in
from rosetta_py.io.mdl_molfile import *
ImportError: No module named rosetta_py.io.mdl_molfile
python3 molfile_to_params.py
File "molfile_to_params.py", line 171
print "WARNING: atom %s has valence > 4" % atom.name
^
SyntaxError: Missing parentheses in call to 'print'. Did you mean print("WARNING: atom %s has valence > 4" % atom.name)?
I have tried running the script with both Python 2 and Python 3, but encountered different errors as outlined above.
Any assistance or guidance on resolving this issue would be greatly appreciated.
The text was updated successfully, but these errors were encountered: