Protracted neuronal recruitment in the temporal lobe of young children

Overview

Code used in the analysis of the study "Protracted neuronal recruitment in the temporal lobe of young children". Data can be browsed and downloaded at Cellxgene. This repository contains all the code used to generate the final Seurat objects and analyses. The code is organized in separate notebooks for each step of the analysis:

1. Merging all samples in a single dataset

2. Label transfer to identify specific neuronal populations

3. Monocle and lineage trajectory analyses

4. Subpopulations of LAMP5+ neurons

5. WGCNA

6. Figures