start testing io.core.utils

.coveragerc

@@ -1,6 +1,6 @@
 [run]
 branch = True
-source = mpcontribs, mpweb_core
+source = mpcontribs, webtzite
 [report]
 exclude_lines =
 # Ignore coverage of code that requires the module to be executed.

mpcontribs/io/core/components.py

@@ -5,7 +5,7 @@
 from mpcontribs.config import mp_level01_titles, mp_id_pattern, object_id_pattern
 from mpcontribs.io.core.utils import nest_dict
 from recdict import RecursiveDict
-from utils import disable_ipython_scrollbar, clean_value
+from utils import clean_value
 from IPython.display import display_html, display, HTML, Image
 
 class HierarchicalData(RecursiveDict):
@@ -285,7 +285,6 @@ def from_items(cls, rdct, **kwargs):
         return super(Table, cls).from_dict(RecursiveDict(rdct), **kwargs)
 
     def _ipython_display_(self):
-        disable_ipython_scrollbar()
         display(HTML(render_dataframe(self)))
 
 class Tables(RecursiveDict):
@@ -327,7 +326,6 @@ def __str__(self):
         return 'mp-ids: {}'.format(' '.join(self.keys()))
 
     def _ipython_display_(self):
-        disable_ipython_scrollbar()
         for identifier, tables in self.iteritems():
             if isinstance(tables, dict) and tables:
                 display_html('<h2>Tabular Data for {}</h2>'.format(identifier), raw=True)
@@ -413,7 +411,6 @@ def __init__(self, config, table):
         self.table = table
 
     def _ipython_display_(self):
-        disable_ipython_scrollbar()
         display(HTML(render_plot(self)))
 
 class Plots(RecursiveDict):
@@ -429,7 +426,6 @@ def __str__(self):
         return 'plots: {}'.format(' '.join(self.keys()))
 
     def _ipython_display_(self):
-        disable_ipython_scrollbar()
         for name, plot in self.iteritems():
             if plot:
                 display_html('<h3>{}</h3>'.format(name), raw=True)
@@ -450,7 +446,6 @@ def __str__(self):
         return 'mp-ids: {}'.format(' '.join(self.keys()))
 
     def _ipython_display_(self):
-        disable_ipython_scrollbar()
         for identifier, plots in self.iteritems():
             if identifier != mp_level01_titles[0] and plots:
                 display_html('<h2>Interactive Plots for {}</h2>'.format(identifier), raw=True)

mpcontribs/io/core/tests/test_utils.py

@@ -0,0 +1,14 @@
+# -*- coding: utf-8 -*-
+from __future__ import unicode_literals
+from nose.tools import *
+from mpcontribs.io.core.utils import *
+
+def test_get_short_object_id():
+    cid = '5a8638add4f144413451852a'
+    short_cid = get_short_object_id(cid)
+    assert_equal(short_cid, '451852a')
+
+def test_make_pair():
+    assert_equal(make_pair('Phase', 'Hollandite'), 'Phase: Hollandite')
+    assert_equal(make_pair('ΔH', '0.066 eV/mol'), 'ΔH: 0.066 eV/mol')
+

mpcontribs/io/core/utils.py

@@ -5,18 +5,6 @@
 from decimal import Decimal
 from mpcontribs.config import mp_level01_titles, mp_id_pattern, csv_comment_char
 
-def flatten_dict(dd, separator='.', prefix=''):
-    """http://stackoverflow.com/a/19647596"""
-    return { prefix + separator + k if prefix else k : v
-            for kk, vv in dd.items()
-            for k, v in flatten_dict(vv, separator, kk).items()
-           } if isinstance(dd, dict) else { prefix : dd }
-
-def unflatten_dict(d):
-    for k in d:
-        value, keys = d.pop(k), k.split('.')
-        d.rec_update(nest_dict({keys[-1]: value}, keys[:-1]))
-
 def get_short_object_id(cid):
     length = 7
     cid_short = str(cid)[-length:]
@@ -125,13 +113,6 @@ def read_csv(body, is_data_section=True, **kwargs):
         **options
     ).dropna(how='all'))
 
-def disable_ipython_scrollbar():
-    pass
-    #from IPython.display import display, Javascript
-    #display(Javascript("""
-    #    require("notebook/js/outputarea").OutputArea.prototype._should_scroll=function(){return false;};
-    #"""))
-
 def nested_dict_iter(nested, scope=''):
     for key, value in nested.iteritems():
         if isinstance(value, collections.Mapping):

setup.py

@@ -27,7 +27,7 @@
         'unidecode', 'psutil', 'nbformat', 'xlrd', 'django-nopassword', 'mod_wsgi',
         'django-require', 'pympler', 'django_cas_ng', 'django-extensions', 'selenium',
         'dash', 'dash-html-components', 'dash-core-components', 'dash-table-experiments',
-        'ase', 'igor', 'xrdtools', 'xrayutilities'
+        'ase', 'igor', 'xrdtools', 'xrayutilities', 'h5py', 'python-coveralls'
     ],
     license = 'MIT',
     keywords = ['materials', 'contribution', 'framework', 'data', 'interactive', 'jupyter'],