upgrade dependencies for deployment

materialsproject · Feb 8, 2024 · 46e4b05 · 46e4b05
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commit 46e4b05
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diff --git a/emmet-api/requirements/deployment.txt b/emmet-api/requirements/deployment.txt
@@ -10,8 +10,6 @@ annotated-types==0.6.0
     # via pydantic
 anyio==4.2.0
     # via starlette
-ase==3.22.1
-    # via matcalc
 asgi-logger==0.1.0
     # via emmet-api (emmet/emmet-api/setup.py)
 asgiref==3.7.2
@@ -26,11 +24,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.34
+boto3==1.34.38
     # via
     #   emmet-api (emmet/emmet-api/setup.py)
     #   maggma
-botocore==1.34.34
+botocore==1.34.38
     # via
     #   boto3
     #   s3transfer
@@ -59,15 +57,15 @@ cycler==0.12.1
     # via matplotlib
 ddsketch==2.0.4
     # via ddtrace
-ddtrace==2.0.10
+ddtrace==2.6.0
     # via emmet-api (emmet/emmet-api/setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
 dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
-emmet-core[all]==0.77.0
+emmet-core==0.78.0rc1
     # via emmet-api (emmet/emmet-api/setup.py)
 envier==0.5.1
     # via ddtrace
@@ -81,26 +79,20 @@ fastapi==0.109.2
     #   maggma
 flask==3.0.2
     # via mongogrant
-fonttools==4.47.2
+fonttools==4.48.1
     # via matplotlib
 future==0.18.3
-    # via
-    #   matminer
-    #   uncertainties
+    # via uncertainties
 gunicorn==21.2.0
     # via emmet-api (emmet/emmet-api/setup.py)
 h11==0.14.0
     # via uvicorn
-h5py==3.10.0
-    # via phonopy
 idna==3.6
     # via
     #   anyio
     #   requests
 importlib-metadata==6.11.0
     # via opentelemetry-api
-inflect==7.0.0
-    # via robocrys
 itsdangerous==2.1.2
     # via flask
 jinja2==3.1.3
@@ -110,11 +102,7 @@ jmespath==1.0.1
     #   boto3
     #   botocore
 joblib==1.3.2
-    # via
-    #   matcalc
-    #   pymatgen
-    #   pymatgen-analysis-diffusion
-    #   scikit-learn
+    # via pymatgen
 jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
@@ -123,21 +111,15 @@ kiwisolver==1.4.5
     # via matplotlib
 latexcodec==2.0.1
     # via pybtex
-maggma==0.62.0
+maggma==0.62.1
     # via emmet-api (emmet/emmet-api/setup.py)
 markupsafe==2.1.5
     # via
     #   jinja2
     #   werkzeug
-matcalc==0.0.4
-    # via emmet-core
-matminer==0.9.0
-    # via robocrys
 matplotlib==3.8.2
     # via
     #   -r python/requirements.txt
-    #   ase
-    #   phonopy
     #   pymatgen
 mongogrant==0.3.3
     # via maggma
@@ -147,33 +129,22 @@ monty==2024.2.2
     # via
     #   emmet-core
     #   maggma
-    #   matminer
     #   pymatgen
-    #   robocrys
 mpmath==1.3.0
     # via sympy
 msgpack==1.0.7
     # via maggma
 networkx==3.2.1
-    # via
-    #   pymatgen
-    #   robocrys
-numpy==1.26.3
+    # via pymatgen
+numpy==1.26.4
     # via
     #   -r python/requirements.txt
-    #   ase
     #   contourpy
-    #   h5py
     #   maggma
-    #   matminer
     #   matplotlib
     #   pandas
-    #   phonopy
     #   pymatgen
-    #   robocrys
-    #   scikit-learn
     #   scipy
-    #   seekpath
     #   shapely
     #   spglib
 opentelemetry-api==1.22.0
@@ -188,15 +159,12 @@ packaging==23.2
     #   plotly
 palettable==3.3.3
     # via pymatgen
-pandas==1.5.3
+pandas==2.2.0
     # via
     #   -r python/requirements.txt
-    #   matminer
     #   pymatgen
 paramiko==3.4.0
     # via sshtunnel
-phonopy==2.21.0
-    # via matcalc
 pillow==10.2.0
     # via matplotlib
 plotly==5.18.0
@@ -205,20 +173,16 @@ protobuf==4.25.2
     # via
     #   ddsketch
     #   ddtrace
-pubchempy==1.0.4
-    # via robocrys
 pybtex==0.24.0
     # via
     #   emmet-core
     #   pymatgen
-    #   robocrys
 pycparser==2.21
     # via cffi
 pydantic==2.6.1
     # via
     #   emmet-core
     #   fastapi
-    #   inflect
     #   maggma
     #   pydantic-settings
 pydantic-core==2.16.2
@@ -229,22 +193,15 @@ pydantic-settings==2.1.0
     #   maggma
 pydash==7.0.7
     # via maggma
-pymatgen==2024.1.27
+pymatgen==2024.2.8
     # via
     #   emmet-core
-    #   matcalc
-    #   matminer
     #   pymatgen-analysis-alloys
-    #   pymatgen-analysis-diffusion
-    #   robocrys
 pymatgen-analysis-alloys==0.0.6
-    # via emmet-core
-pymatgen-analysis-diffusion==2023.8.15
-    # via emmet-core
+    # via emmet-api (emmet/emmet-api/setup.py)
 pymongo==4.6.1
     # via
     #   maggma
-    #   matminer
     #   mongogrant
 pynacl==1.5.0
     # via paramiko
@@ -261,9 +218,7 @@ python-dotenv==1.0.1
 pytz==2024.1
     # via pandas
 pyyaml==6.0.1
-    # via
-    #   phonopy
-    #   pybtex
+    # via pybtex
 pyzmq==25.1.2
     # via maggma
 referencing==0.33.0
@@ -272,11 +227,8 @@ referencing==0.33.0
     #   jsonschema-specifications
 requests==2.31.0
     # via
-    #   matminer
     #   mongogrant
     #   pymatgen
-robocrys==0.2.8
-    # via emmet-core
 rpds-py==0.17.1
     # via
     #   jsonschema
@@ -285,22 +237,14 @@ ruamel-yaml==0.17.40
     # via
     #   maggma
     #   pymatgen
-    #   robocrys
 ruamel-yaml-clib==0.2.8
     # via ruamel-yaml
 s3transfer==0.10.0
     # via boto3
-scikit-learn==1.4.0
-    # via matminer
 scipy==1.12.0
     # via
     #   -r python/requirements.txt
-    #   ase
     #   pymatgen
-    #   robocrys
-    #   scikit-learn
-seekpath==2.1.0
-    # via emmet-core
 sentinels==1.0.0
     # via mongomock
 setproctitle==1.3.3
@@ -319,29 +263,20 @@ six==1.16.0
 sniffio==1.3.0
     # via anyio
 spglib==2.3.0
-    # via
-    #   phonopy
-    #   pymatgen
-    #   robocrys
-    #   seekpath
+    # via pymatgen
 sshtunnel==0.4.0
     # via maggma
 starlette==0.36.3
     # via fastapi
 sympy==1.12
-    # via
-    #   matminer
-    #   pymatgen
+    # via pymatgen
 tabulate==0.9.0
     # via pymatgen
 tenacity==8.2.3
     # via plotly
-threadpoolctl==3.2.0
-    # via scikit-learn
 tqdm==4.66.1
     # via
     #   maggma
-    #   matminer
     #   pymatgen
 typing-extensions==4.9.0
     # via
@@ -351,11 +286,12 @@ typing-extensions==4.9.0
     #   ddtrace
     #   emmet-core
     #   fastapi
-    #   inflect
     #   pydantic
     #   pydantic-core
     #   pydash
     #   uvicorn
+tzdata==2023.4
+    # via pandas
 uncertainties==3.1.7
     # via pymatgen
 urllib3==2.0.7

diff --git a/emmet-core/requirements/deployment.txt b/emmet-core/requirements/deployment.txt
@@ -14,7 +14,7 @@ contourpy==1.2.0
     # via matplotlib
 cycler==0.12.1
     # via matplotlib
-fonttools==4.47.2
+fonttools==4.48.1
     # via matplotlib
 future==0.18.3
     # via uncertainties
@@ -38,7 +38,7 @@ mpmath==1.3.0
     # via sympy
 networkx==3.2.1
     # via pymatgen
-numpy==1.26.3
+numpy==1.26.4
     # via
     #   -r python/requirements.txt
     #   contourpy
@@ -53,7 +53,7 @@ packaging==23.2
     #   plotly
 palettable==3.3.3
     # via pymatgen
-pandas==1.5.3
+pandas==2.2.0
     # via
     #   -r python/requirements.txt
     #   pymatgen
@@ -73,7 +73,7 @@ pydantic-core==2.16.2
     # via pydantic
 pydantic-settings==2.1.0
     # via emmet-core (emmet/emmet-core/setup.py)
-pymatgen==2024.1.27
+pymatgen==2024.2.8
     # via emmet-core (emmet/emmet-core/setup.py)
 pyparsing==3.1.1
     # via matplotlib
@@ -89,7 +89,7 @@ pyyaml==6.0.1
     # via pybtex
 requests==2.31.0
     # via pymatgen
-ruamel-yaml==0.18.5
+ruamel-yaml==0.18.6
     # via pymatgen
 ruamel-yaml-clib==0.2.8
     # via ruamel-yaml
@@ -117,6 +117,8 @@ typing-extensions==4.9.0
     #   emmet-core (emmet/emmet-core/setup.py)
     #   pydantic
     #   pydantic-core
+tzdata==2023.4
+    # via pandas
 uncertainties==3.1.7
     # via pymatgen
 urllib3==2.2.0