Automated dependency upgrades (#927)

* update dependencies for emmet-api (ubuntu-latest/py3.10)

* update dependencies for emmet-api (ubuntu-latest/py3.11)

* update dependencies for emmet-api (ubuntu-latest/py3.9)

* update dependencies for emmet-builders (ubuntu-latest/py3.10)

* update dependencies for emmet-builders (ubuntu-latest/py3.11)

* update dependencies for emmet-builders (ubuntu-latest/py3.9)

* update dependencies for emmet-core (ubuntu-latest/py3.10)

* update dependencies for emmet-core (ubuntu-latest/py3.11)

* update dependencies for emmet-core (ubuntu-latest/py3.9)

---------

Co-authored-by: github-actions <github-actions@github.com>

emmet-api/requirements/ubuntu-latest_py3.10.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -63,7 +63,7 @@ ddtrace==2.0.10
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -115,7 +115,7 @@ joblib==1.3.2
     #   pymatgen
     #   pymatgen-analysis-diffusion
     #   scikit-learn
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -125,7 +125,7 @@ latexcodec==2.0.1
     # via pybtex
 maggma==0.61.0
     # via emmet-api (setup.py)
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   werkzeug
@@ -289,7 +289,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-api/requirements/ubuntu-latest_py3.10_extras.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -79,7 +79,7 @@ deprecated==1.2.14
     # via opentelemetry-api
 distlib==0.3.8
     # via virtualenv
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -153,7 +153,7 @@ joblib==1.3.2
     #   scikit-learn
 jsmin==3.0.1
     # via mkdocs-minify-plugin
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -172,7 +172,7 @@ markdown==3.5.2
     #   mkdocs-material
     #   mkdocstrings
     #   pymdown-extensions
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   mkdocs
@@ -422,7 +422,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-api/requirements/ubuntu-latest_py3.11.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -63,7 +63,7 @@ ddtrace==2.0.10
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -111,7 +111,7 @@ joblib==1.3.2
     #   pymatgen
     #   pymatgen-analysis-diffusion
     #   scikit-learn
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -121,7 +121,7 @@ latexcodec==2.0.1
     # via pybtex
 maggma==0.61.0
     # via emmet-api (setup.py)
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   werkzeug
@@ -285,7 +285,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-api/requirements/ubuntu-latest_py3.11_extras.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -79,7 +79,7 @@ deprecated==1.2.14
     # via opentelemetry-api
 distlib==0.3.8
     # via virtualenv
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -148,7 +148,7 @@ joblib==1.3.2
     #   scikit-learn
 jsmin==3.0.1
     # via mkdocs-minify-plugin
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -167,7 +167,7 @@ markdown==3.5.2
     #   mkdocs-material
     #   mkdocstrings
     #   pymdown-extensions
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   mkdocs
@@ -417,7 +417,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-api/requirements/ubuntu-latest_py3.9.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -63,7 +63,7 @@ ddtrace==2.0.10
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -119,7 +119,7 @@ joblib==1.3.2
     #   pymatgen
     #   pymatgen-analysis-diffusion
     #   scikit-learn
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -129,7 +129,7 @@ latexcodec==2.0.1
     # via pybtex
 maggma==0.61.0
     # via emmet-api (setup.py)
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   werkzeug
@@ -293,7 +293,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-api/requirements/ubuntu-latest_py3.9_extras.txt

@@ -26,11 +26,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -79,7 +79,7 @@ deprecated==1.2.14
     # via opentelemetry-api
 distlib==0.3.8
     # via virtualenv
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -160,7 +160,7 @@ joblib==1.3.2
     #   scikit-learn
 jsmin==3.0.1
     # via mkdocs-minify-plugin
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -179,7 +179,7 @@ markdown==3.5.2
     #   mkdocs-material
     #   mkdocstrings
     #   pymdown-extensions
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   mkdocs
@@ -429,7 +429,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   pymatgen

emmet-builders/requirements/ubuntu-latest_py3.10.txt

@@ -30,9 +30,9 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.22
+boto3==1.34.23
     # via maggma
-botocore==1.34.22
+botocore==1.34.23
     # via
     #   boto3
     #   s3transfer
@@ -61,7 +61,7 @@ cython==3.0.8
     # via chgnet
 dgl==1.1.3
     # via matgl
-dnspython==2.4.2
+dnspython==2.5.0
     # via
     #   maggma
     #   pymongo
@@ -118,7 +118,7 @@ joblib==1.3.2
     #   pymatgen
     #   pymatgen-analysis-diffusion
     #   scikit-learn
-jsonschema==4.21.0
+jsonschema==4.21.1
     # via maggma
 jsonschema-specifications==2023.12.1
     # via jsonschema
@@ -132,7 +132,7 @@ lightning-utilities==0.10.1
     #   torchmetrics
 maggma==0.61.0
     # via emmet-builders (setup.py)
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via
     #   jinja2
     #   werkzeug
@@ -252,7 +252,7 @@ pillow==10.2.0
     # via matplotlib
 plotly==5.18.0
     # via pymatgen
-psutil==5.9.7
+psutil==5.9.8
     # via dgl
 pubchempy==1.0.4
     # via robocrys
@@ -348,7 +348,7 @@ s3transfer==0.10.0
     # via boto3
 scikit-learn==1.4.0
     # via matminer
-scipy==1.11.4
+scipy==1.12.0
     # via
     #   ase
     #   dgl