Automated dependency upgrades (#942)

* update dependencies for emmet-api (ubuntu-latest/py3.10)

* update dependencies for emmet-api (ubuntu-latest/py3.11)

* update dependencies for emmet-api (ubuntu-latest/py3.9)

* update dependencies for emmet-builders (ubuntu-latest/py3.10)

* update dependencies for emmet-builders (ubuntu-latest/py3.11)

* update dependencies for emmet-builders (ubuntu-latest/py3.9)

* update dependencies for emmet-core (ubuntu-latest/py3.10)

* update dependencies for emmet-core (ubuntu-latest/py3.11)

* update dependencies for emmet-core (ubuntu-latest/py3.9)

---------

Co-authored-by: github-actions <github-actions@github.com>

emmet-api/requirements/ubuntu-latest_py3.10.txt

@@ -24,11 +24,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.42
+boto3==1.34.44
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.42
+botocore==1.34.44
     # via
     #   boto3
     #   s3transfer
@@ -51,21 +51,21 @@ click==8.1.7
     #   uvicorn
 contourpy==1.2.0
     # via matplotlib
-cryptography==42.0.2
+cryptography==42.0.3
     # via paramiko
 cycler==0.12.1
     # via matplotlib
 ddsketch==2.0.4
     # via ddtrace
-ddtrace==2.6.2
+ddtrace==2.6.3
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
-dnspython==2.5.0
+dnspython==2.6.0
     # via
     #   maggma
     #   pymongo
-emmet-core==0.78.0rc3
+emmet-core==0.78.0rc4
     # via emmet-api (setup.py)
 envier==0.5.1
     # via ddtrace
@@ -79,7 +79,7 @@ fastapi==0.109.2
     #   maggma
 flask==3.0.2
     # via mongogrant
-fonttools==4.48.1
+fonttools==4.49.0
     # via matplotlib
 future==0.18.3
     # via uncertainties
@@ -111,7 +111,7 @@ kiwisolver==1.4.5
     # via matplotlib
 latexcodec==2.0.1
     # via pybtex
-maggma==0.63.1
+maggma==0.63.2
     # via emmet-api (setup.py)
 markupsafe==2.1.5
     # via
@@ -164,7 +164,7 @@ pillow==10.2.0
     # via matplotlib
 plotly==5.19.0
     # via pymatgen
-protobuf==4.25.2
+protobuf==4.25.3
     # via
     #   ddsketch
     #   ddtrace
@@ -182,7 +182,7 @@ pydantic==2.6.1
     #   pydantic-settings
 pydantic-core==2.16.2
     # via pydantic
-pydantic-settings==2.1.0
+pydantic-settings==2.2.0
     # via
     #   emmet-core
     #   maggma
@@ -242,7 +242,7 @@ sentinels==1.0.0
     # via mongomock
 setproctitle==1.3.3
     # via emmet-api (setup.py)
-shapely==2.0.2
+shapely==2.0.3
     # via
     #   emmet-api (setup.py)
     #   pymatgen-analysis-alloys

emmet-api/requirements/ubuntu-latest_py3.10_extras.txt

@@ -24,11 +24,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.42
+boto3==1.34.44
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.42
+botocore==1.34.44
     # via
     #   boto3
     #   s3transfer
@@ -60,28 +60,26 @@ colorama==0.4.6
 contourpy==1.2.0
     # via matplotlib
 coverage[toml]==7.4.1
-    # via
-    #   coverage
-    #   pytest-cov
-cryptography==42.0.2
+    # via pytest-cov
+cryptography==42.0.3
     # via paramiko
 csscompressor==0.9.5
     # via mkdocs-minify-plugin
 cycler==0.12.1
     # via matplotlib
 ddsketch==2.0.4
     # via ddtrace
-ddtrace==2.6.2
+ddtrace==2.6.3
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
 distlib==0.3.8
     # via virtualenv
-dnspython==2.5.0
+dnspython==2.6.0
     # via
     #   maggma
     #   pymongo
-emmet-core==0.78.0rc3
+emmet-core==0.78.0rc4
     # via emmet-api (setup.py)
 envier==0.5.1
     # via ddtrace
@@ -100,7 +98,7 @@ flake8==7.0.0
     # via emmet-api (setup.py)
 flask==3.0.2
     # via mongogrant
-fonttools==4.48.1
+fonttools==4.49.0
     # via matplotlib
 future==0.18.3
     # via uncertainties
@@ -151,7 +149,7 @@ latexcodec==2.0.1
     # via pybtex
 livereload==2.6.3
     # via emmet-api (setup.py)
-maggma==0.63.1
+maggma==0.63.2
     # via emmet-api (setup.py)
 markdown==3.5.2
     # via
@@ -269,7 +267,7 @@ pluggy==1.4.0
     # via pytest
 pre-commit==3.6.1
     # via emmet-api (setup.py)
-protobuf==4.25.2
+protobuf==4.25.3
     # via
     #   ddsketch
     #   ddtrace
@@ -291,7 +289,7 @@ pydantic==2.6.1
     #   pydantic-settings
 pydantic-core==2.16.2
     # via pydantic
-pydantic-settings==2.1.0
+pydantic-settings==2.2.0
     # via
     #   emmet-core
     #   maggma
@@ -321,7 +319,7 @@ pynacl==1.5.0
     # via paramiko
 pyparsing==3.1.1
     # via matplotlib
-pytest==8.0.0
+pytest==8.0.1
     # via
     #   emmet-api (setup.py)
     #   pytest-cov
@@ -376,7 +374,7 @@ sentinels==1.0.0
     # via mongomock
 setproctitle==1.3.3
     # via emmet-api (setup.py)
-shapely==2.0.2
+shapely==2.0.3
     # via
     #   emmet-api (setup.py)
     #   pymatgen-analysis-alloys

emmet-api/requirements/ubuntu-latest_py3.11.txt

@@ -24,11 +24,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.42
+boto3==1.34.44
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.42
+botocore==1.34.44
     # via
     #   boto3
     #   s3transfer
@@ -51,21 +51,21 @@ click==8.1.7
     #   uvicorn
 contourpy==1.2.0
     # via matplotlib
-cryptography==42.0.2
+cryptography==42.0.3
     # via paramiko
 cycler==0.12.1
     # via matplotlib
 ddsketch==2.0.4
     # via ddtrace
-ddtrace==2.6.2
+ddtrace==2.6.3
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
-dnspython==2.5.0
+dnspython==2.6.0
     # via
     #   maggma
     #   pymongo
-emmet-core==0.78.0rc3
+emmet-core==0.78.0rc4
     # via emmet-api (setup.py)
 envier==0.5.1
     # via ddtrace
@@ -75,7 +75,7 @@ fastapi==0.109.2
     #   maggma
 flask==3.0.2
     # via mongogrant
-fonttools==4.48.1
+fonttools==4.49.0
     # via matplotlib
 future==0.18.3
     # via uncertainties
@@ -107,7 +107,7 @@ kiwisolver==1.4.5
     # via matplotlib
 latexcodec==2.0.1
     # via pybtex
-maggma==0.63.1
+maggma==0.63.2
     # via emmet-api (setup.py)
 markupsafe==2.1.5
     # via
@@ -160,7 +160,7 @@ pillow==10.2.0
     # via matplotlib
 plotly==5.19.0
     # via pymatgen
-protobuf==4.25.2
+protobuf==4.25.3
     # via
     #   ddsketch
     #   ddtrace
@@ -178,7 +178,7 @@ pydantic==2.6.1
     #   pydantic-settings
 pydantic-core==2.16.2
     # via pydantic
-pydantic-settings==2.1.0
+pydantic-settings==2.2.0
     # via
     #   emmet-core
     #   maggma
@@ -238,7 +238,7 @@ sentinels==1.0.0
     # via mongomock
 setproctitle==1.3.3
     # via emmet-api (setup.py)
-shapely==2.0.2
+shapely==2.0.3
     # via
     #   emmet-api (setup.py)
     #   pymatgen-analysis-alloys

emmet-api/requirements/ubuntu-latest_py3.11_extras.txt

@@ -24,11 +24,11 @@ bcrypt==4.1.2
     # via paramiko
 blinker==1.7.0
     # via flask
-boto3==1.34.42
+boto3==1.34.44
     # via
     #   emmet-api (setup.py)
     #   maggma
-botocore==1.34.42
+botocore==1.34.44
     # via
     #   boto3
     #   s3transfer
@@ -60,28 +60,26 @@ colorama==0.4.6
 contourpy==1.2.0
     # via matplotlib
 coverage[toml]==7.4.1
-    # via
-    #   coverage
-    #   pytest-cov
-cryptography==42.0.2
+    # via pytest-cov
+cryptography==42.0.3
     # via paramiko
 csscompressor==0.9.5
     # via mkdocs-minify-plugin
 cycler==0.12.1
     # via matplotlib
 ddsketch==2.0.4
     # via ddtrace
-ddtrace==2.6.2
+ddtrace==2.6.3
     # via emmet-api (setup.py)
 deprecated==1.2.14
     # via opentelemetry-api
 distlib==0.3.8
     # via virtualenv
-dnspython==2.5.0
+dnspython==2.6.0
     # via
     #   maggma
     #   pymongo
-emmet-core==0.78.0rc3
+emmet-core==0.78.0rc4
     # via emmet-api (setup.py)
 envier==0.5.1
     # via ddtrace
@@ -95,7 +93,7 @@ flake8==7.0.0
     # via emmet-api (setup.py)
 flask==3.0.2
     # via mongogrant
-fonttools==4.48.1
+fonttools==4.49.0
     # via matplotlib
 future==0.18.3
     # via uncertainties
@@ -146,7 +144,7 @@ latexcodec==2.0.1
     # via pybtex
 livereload==2.6.3
     # via emmet-api (setup.py)
-maggma==0.63.1
+maggma==0.63.2
     # via emmet-api (setup.py)
 markdown==3.5.2
     # via
@@ -264,7 +262,7 @@ pluggy==1.4.0
     # via pytest
 pre-commit==3.6.1
     # via emmet-api (setup.py)
-protobuf==4.25.2
+protobuf==4.25.3
     # via
     #   ddsketch
     #   ddtrace
@@ -286,7 +284,7 @@ pydantic==2.6.1
     #   pydantic-settings
 pydantic-core==2.16.2
     # via pydantic
-pydantic-settings==2.1.0
+pydantic-settings==2.2.0
     # via
     #   emmet-core
     #   maggma
@@ -316,7 +314,7 @@ pynacl==1.5.0
     # via paramiko
 pyparsing==3.1.1
     # via matplotlib
-pytest==8.0.0
+pytest==8.0.1
     # via
     #   emmet-api (setup.py)
     #   pytest-cov
@@ -371,7 +369,7 @@ sentinels==1.0.0
     # via mongomock
 setproctitle==1.3.3
     # via emmet-api (setup.py)
-shapely==2.0.2
+shapely==2.0.3
     # via
     #   emmet-api (setup.py)
     #   pymatgen-analysis-alloys