Patch notes

25-03-2021 (v1.2.1)

• Added argument min_n which was in documentation but not implemented in code.

20-03-2021 (v1.2.0)

• Fixed Issue#1 in weighted correlation

17-03-2021 (v1.1.3)

• Fixed minor issue that would cause an error after succesful operation.

17-03-2021 (v1.1.2)

• Fixed issue that caused randomsample and raw_n to not work properly.
• Added some lines to make it easier to work with straight from Python.
• Added openpyxl to the list of dependencies to install in documentation.

24-11-2020 (v1.1.1)

• Fixed an issue that would cause a new reformatted extended pedigree to be saved to the wrong directory.
• Fixed an issue that would cause columns in --exlucde to still be included.

23-11-2020 (v1.1.0)

• Added --bivar option. See Generating cross-trait-correlations in the documentation.
• Rearranged arguments so the order they are printed in with -h and --morehelp are in line with documentation.

19-11-2020 (v1.0.0)

• Initial release

Description

This is the main page for the KinShipCorrelationGenerator. It can be used to quickly, and efficiently calculate phenotypic correlations in different familial pairs, (e.g. twin-correlations, parent-offspring correlations, etc) in large complex pedigrees. By default correlations are weighted for multiple occurrences of individuals to correct for larger families.

See the documentation for more information.

Usage

See documentation.