adRn-s is testing #47
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| name: Rintro2HTML | |
| run-name: ${{ github.actor }} is testing | |
| on: | |
| push: | |
| branches: ["2023.03"] | |
| jobs: | |
| build: | |
| name: Conda Tests | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| container: node:latest | |
| steps: | |
| - name: Print shell information | |
| run: | | |
| echo "Shell: $SHELL" | |
| echo "Shell version: $($SHELL --version)" | |
| uname -a || true | |
| - uses: actions/checkout@v2 | |
| - name: Check yaml | |
| run: | | |
| cat conda_config.yml || true | |
| - name: Install Conda environment with Micromamba | |
| uses: mamba-org/setup-micromamba@main | |
| with: | |
| environment-file: conda_config.yml | |
| # environment-name: Rintro2023 | |
| - name: List Available Environment | |
| shell: bash -l {0} | |
| run: micromamba list | |
| - name: Activate Environment | |
| run: micromamba activate Rintro2023 | |
| - name: Check Installation | |
| run: | | |
| echo "after conda activate Rintro: PATH=$PATH;" | |
| which R || true | |
| R --version || true | |
| - name: Render R Markdown and Move Site | |
| run: | | |
| Rscript -e "rmarkdown::render_site('rmd')" | |
| mv projects/tidyverse/*_files projects/tidyverse/*.html projects/tidyverse/styles.css rmd/_site/ | |
| mv projects/tidyverse/images/* rmd/_site/images/ | |
| - name: Show all files | |
| run: ls -Ral | |
| - name: Deploy to GitHub Pages | |
| uses: peaceiris/actions-gh-pages@v3 | |
| if: ${{ !env.ACT }} | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: | | |
| ./rmd/_site | |