add output/ directory to writes

maxplanck-ie · Apr 8, 2024 · cab4092 · cab4092
1 parent 65f3f1a
commit cab4092
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diff --git a/qmd/03_GettingData.qmd b/qmd/03_GettingData.qmd
@@ -86,7 +86,7 @@ write.csv(iris, gzfile("output/iris.csv.gz"))
 - Save only the subset of flowers where Species="setosa" to a file setosa.tsv
 
 ```{r, eval=FALSE, echo=FALSE}
-write.csv(iris[iris$Species=="setosa",], file="setosa.csv", row.names=FALSE, quote=FALSE)
+write.csv(iris[iris$Species=="setosa",], file="output/setosa.csv", row.names=FALSE, quote=FALSE)
 ```
 
 

diff --git a/qmd/07_DataImport.qmd b/qmd/07_DataImport.qmd
@@ -268,7 +268,7 @@ Finally, we could need to save our data as a new file for later use or sharing,
 #| echo: true
 #| eval: false
 
-write_csv(rna_wide_noNAs, file = "rna_wide.csv")
+write_csv(rna_wide_noNAs, file = "output/rna_wide.csv")
 
 ```