Merge pull request #748 from maxplanck-ie/dev_ksikora2

trimmer noncoding
maxplanck-ie · Jan 29, 2021 · 060bcd4 · 060bcd4
2 parents e01f274 + 9513548
commit 060bcd4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/snakePipes/workflows/noncoding-RNA-seq/defaults.yaml b/snakePipes/workflows/noncoding-RNA-seq/defaults.yaml
@@ -32,7 +32,7 @@ pairedEnd: True
 downsample:
 ## Options for trimming
 trim: False
-trimmer: fastp
+trimmer: cutadapt
 trimmerOptions:
 ## further options
 mode: alignment,deepTools_qc