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A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.
Forked from jibsch/Socrates
Socrates: Identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads
Code related to the Genome Jigsaw blog
An implementation of the perfect phylogeny and incomplete phylogeny algorithms, for building and inferring phylogenetic trees.
Forked from swcarpentry/python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.