Pinned Loading

1. SVclone SVclone Public

   A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.

   Python 40 10

2. Oshlack/MINTIE Oshlack/MINTIE Public

   Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

   Python 33 7

3. WEHIGenomicsRnD/nanopore-demux-count WEHIGenomicsRnD/nanopore-demux-count Public

   Demultiplex reads and count sequences of interest from Nanopore data

   Nextflow

4. WEHIGenomicsRnD/nanopore-transfer-automation WEHIGenomicsRnD/nanopore-transfer-automation Public

   Performs archiving and transfer of Nanopore sequencing data

   Python 2 1

5. WEHISCORE/CELSeq-pipeline WEHISCORE/CELSeq-pipeline Public

   Pipeline for processing CEL-seq and minibulk data from raw reads to count matrix.

   Python 1

6. Oshlack/ec-dtu-pipe Oshlack/ec-dtu-pipe Public

   Pipeline for performing differential transcript usage analysis using equivalence classes, transcript quantifications and/or exon counts

   R 4 1