Merge pull request #20 from ufbmi/update-makefile

updated Makefile to remove assertions of ChEBI classes being subclass…
mcwdsi · Jun 13, 2023 · d079e48 · d079e48
2 parents 1c2a57e + a61c941
commit d079e48
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/src/ontology/dron.Makefile b/src/ontology/dron.Makefile
@@ -96,7 +96,9 @@ download_components:
 	$(call swap_chebi,$(COMPONENTSDIR)/dron-rxnorm.owl)
 	wget $(DRON_INGREDIENTS_RELEASE) -O $(COMPONENTSDIR)/dron-ingredient.owl
 	$(call swap_chebi,$(COMPONENTSDIR)/dron-ingredient.owl)
-
+	grep -v "SubClassOf.*CHEBI_.*/OBI_0000047" components/dron-ingredient.owl > components/dron-ingredient-remediated.owl
+	mv components/dron-ingredient.owl components/dron-ingredient-initial.owl
+	mv components/dron-ingredient-remediated.owl components/dron-ingredient.owl 
 
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 ## From March 2021 Migration ###