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  • University of California, San Diego
  • San Diego, CA, USA

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Pinned

  1. AlexandrovLab/SigProfilerExtractor AlexandrovLab/SigProfilerExtractor Public

    SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities i…

    Python 145 50

  2. AlexandrovLab/SigProfilerMatrixGenerator AlexandrovLab/SigProfilerMatrixGenerator Public

    SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED fil…

    Python 94 32

  3. AlexandrovLab/SigProfilerPlotting AlexandrovLab/SigProfilerPlotting Public

    SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational patterns in cancer genomes. The tool seamlessly integrates with oth…

    Python 45 13