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A repository to create automations that download and Install external bioinformatics packages.

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Biocore Package Downloads Repos

A repository to create automations that download and Install external bioinformatics packages.

For each installed package, this tool can be setup to run an automation that checks if a new version of the tool is available. As soon as it detects a new release of the tool, the automation will download and install it locally.

What It Does

For each package installed,the automation creates a root directory that is the name of the tool in the path set in the main Configuration (EXTERNAL_SOFTWARE_BASE).

Under the tool root directory, you will find:

  • A file (current_release_NUMBER) that stores the latest version of this tool
  • A directory for each version of this tool installed
  • A symbolic with this tool name that points to the latest version installed

Package Documentation: https://github.com/mdibl/package_downloads/wiki

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A repository to create automations that download and Install external bioinformatics packages.

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