chore: seperate RTD env and testing env

mdtanker · Nov 30, 2023 · 0d1621d · 0d1621d
1 parent 0bf7f87
commit 0d1621d
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Showing 6 changed files with 43 additions and 4 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -73,7 +73,7 @@ jobs:
         uses: conda-incubator/setup-miniconda@v2
         with:
           activate-environment: invert4geom
-          environment-file: environment.yml
+          environment-file: env/test_env.yml
           python-version: ${{ matrix.python-version }}
           channels: conda-forge,nodefaults
           channel-priority: strict

diff --git a/.gitignore b/.gitignore
@@ -107,7 +107,7 @@ celerybeat.pid
 # Environments
 .env
 .venv
-env/
+# env/
 venv/
 ENV/
 env.bak/

diff --git a/.readthedocs.yml b/.readthedocs.yml
@@ -12,4 +12,4 @@ sphinx:
   configuration: docs/conf.py
 
 conda:
-  environment: environment.yml
+  environment: env/RTD_env.yml
diff --git a/env/RTD_env.yml b/env/RTD_env.yml
@@ -0,0 +1,40 @@
+# Requirements for running the github action: test only need run-time dependencies
+name: invert4geom
+channels:
+  - conda-forge
+  - defaults
+dependencies:
+  - python>=3.8
+  - pip
+  # Run-time
+  - numpy
+  - pandas
+  - xarray
+  - verde>=1.8.0
+  - rioxarray
+  - pykdtree
+  - xrft
+  - harmonica>=0.6.0
+  - antarctic-plots>=0.0.6
+  - numba
+  - scipy
+  - nptyping
+  - tqdm
+  - pygmt
+  - dask
+  - optuna>=3.1.0
+  - botorch>=0.4.0
+  # docs
+  - sphinx>=4.0
+  - myst-parser
+  - sphinx-copybutton
+  - sphinx-autodoc-typehints
+  - sphinx-book-theme>=0.3
+  - sphinx-design
+  - nbsphinx
+  - pip:
+      - numba-progress
+      - tqdm_joblib
+      - psutil
+      - joblib
+      - .
diff --git a/environment.yml → env/test_env.yml b/environment.yml → env/test_env.yml
diff --git a/pyproject.toml b/pyproject.toml
@@ -53,7 +53,6 @@ dependencies = [
 
 #  "geopandas",
 #  "boule",
-#  "numba-progress",
 ]
 
 [project.optional-dependencies]