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DESCRIPTION
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DESCRIPTION
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Package: proturn
Type: Package
Title: System-wise protein turnover curve fitting
Version: 0.99.1
Date: 2017-10-06
Author: Chen Meng, Jana Zecha
Maintainer: Chen Meng <mengchen18@gmail.com>
Description: Pulse-SILAC has been used to analyze protein turnover in a system-wise.
This package provides convenient functions to fit protein degradation and synthesis curves
using pulsed SILAC data. In addition, a graphical user interface is provided.
License: GPL-2
Depends:
R (>= 3.4.0), shinyBS, parallel
Imports:
methods, matrixStats, graphics, stats, shiny, DT, grDevices, utils
VignetteBuilder: knitr
Suggests:
BiocStyle, knitr, rmarkdown
biocViews: Software, Proteomics, GUI, MassSpectrometry
NeedsCompilation: no
RoxygenNote: 6.0.1
Collate:
'collapseIntensity.R'
'functionSynFitting.R'
'functionsDegFitting.R'
'functionsFitting.R'
'functionsSimPlot.R'
'runShiny.R'
'module.R'
'refitwoOutlier.R'