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Update basecalling.rst
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nkleinbo committed Nov 13, 2017
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7 changes: 3 additions & 4 deletions docs/basecalling.rst
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Expand Up @@ -202,13 +202,12 @@ Evaluate with fastqc::
mkdir ~/www/1D_fastqc
mkdir ~/www/1D2_fastqc
fastqc -o www/fastqc_1D/ <1d.fastq>
fastqc -o www/fastqc_1D2/ <1d2.fastq>
fastqc -o www/fastqc_1D/ 1D_basecall.fastq
fastqc -o www/fastqc_1D2/ 1D2basecall.fastq
After that, you can load the reports in your web browser::

http://YOUR_OPENSTACK_INSTANCE_IP/quast/summary/report.html

http://YOUR_OPENSTACK_INSTANCE_IP/



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