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47 update conda build #29

47 update conda build

47 update conda build #29

name: Python Package and Tests using Conda
on: [pull_request]
jobs:
build-linux:
runs-on: ubuntu-latest
strategy:
max-parallel: 5
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.11
uses: actions/setup-python@v4
with:
python-version: '3.11'
- name: Add conda to system path
run: |
# $CONDA is an environment variable pointing to the root of the miniconda directory
echo $CONDA/bin >> $GITHUB_PATH
#- name: Install dependencies
# run: |
# # conda env update --file environment_dev.yml --name base
# conda env create --file environment_dev.yml --name pymica-dev
# # $CONDA/bin/activate pymica-dev
- name: Setup conda environment
uses: conda-incubator/setup-miniconda@v2
with:
auto-activate-base: true
activate-environment: pymica-dev
environment-file: environment_dev.yml
- name: Lint with flake8
run: |
source /usr/share/miniconda/bin/activate pymica-dev
conda install flake8
# stop the build if there are Python syntax errors or undefined names
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Test with pytest
run: |
source /usr/share/miniconda/bin/activate pymica-dev
python /home/runner/work/pymica/pymica/setup.py build_ext --inplace
conda install pytest
export PYTHONPATH=$PYTHONPATH:/home/runner/work/pymica/pymica/
pytest