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fixed newbler bug - removed -consed parameter [#13 state:resolved]
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mfiers committed Apr 1, 2011
1 parent e965f77 commit 57b913d
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion template2/newbler.mk
Original file line number Diff line number Diff line change
Expand Up @@ -41,7 +41,7 @@ newbler: 454AllContigs.fna 454LargeContigs.all.png

#454LargeContigs.all.png

newbler_cl = runAssembly -ace -o . -consed \
newbler_cl = runAssembly -ace -o . \
$(if $(newbler_mid_configuration),-mcf $(newbler_mid_configuration)) \
$(if $(newbler_min_identity), -mi $(newbler_min_identity)) \
$(if $(newbler_largecontig_cutoff), -l $(newbler_largecontig_cutoff)) \
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