Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
input		input
input_windows		input_windows
Alphabet.cpp		Alphabet.cpp
Alphabet.cpp~		Alphabet.cpp~
Alphabet.h		Alphabet.h
Alphabet.h~		Alphabet.h~
BitPrefix.cpp		BitPrefix.cpp
BitPrefix.cpp~		BitPrefix.cpp~
BitPrefix.h		BitPrefix.h
BitPrefix.h~		BitPrefix.h~
ChunkIndexer.cpp		ChunkIndexer.cpp
ChunkIndexer.cpp~		ChunkIndexer.cpp~
ChunkIndexer.h		ChunkIndexer.h
ChunkIndexer.h~		ChunkIndexer.h~
DNAAlphabet.cpp		DNAAlphabet.cpp
DNAAlphabet.h		DNAAlphabet.h
DNALineReader.cpp		DNALineReader.cpp
DNALineReader.h		DNALineReader.h
DNAReader.cpp		DNAReader.cpp
DNAReader.h		DNAReader.h
IndexConfig.cpp		IndexConfig.cpp
IndexConfig.cpp~		IndexConfig.cpp~
IndexConfig.h		IndexConfig.h
IndexManager.cpp		IndexManager.cpp
IndexManager.h		IndexManager.h
InputReader.cpp		InputReader.cpp
InputReader.h		InputReader.h
Makefile		Makefile
Makefile~		Makefile~
MergeManager.cpp		MergeManager.cpp
MergeManager.cpp~		MergeManager.cpp~
MergeManager.h		MergeManager.h
MergeManager.h~		MergeManager.h~
OrderCell.cpp		OrderCell.cpp
OrderCell.h		OrderCell.h
README.md		README.md
Utils.cpp		Utils.cpp
Utils.h		Utils.h
buildSA.cpp		buildSA.cpp
divsufsort.c		divsufsort.c
divsufsort.h		divsufsort.h
indexconfig		indexconfig
indexconfig2GB		indexconfig2GB
indexconfig2GB_combined		indexconfig2GB_combined
indexconfigu		indexconfigu
indexconfigutest3files		indexconfigutest3files
indexconfigutest5GB		indexconfigutest5GB
mainSortChunks.cpp		mainSortChunks.cpp
mainSortChunks.cpp~		mainSortChunks.cpp~
sortchunks		sortchunks

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digestorder

Defines order of interleaving for external-memory merge sort