Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

all-combos schema JSON too large to push to GitHub #144

Open
turbomam opened this issue Jul 27, 2023 · 1 comment
Open

all-combos schema JSON too large to push to GitHub #144

turbomam opened this issue Jul 27, 2023 · 1 comment

Comments

@turbomam
Copy link
Collaborator

  • data_harmonizer/schemas/mixs_6_2_rc.json
  • schema-derivatives/mixs_6_2_rc.json
@turbomam
Copy link
Collaborator Author

turbomam commented Jul 27, 2023 •
edited
Loading

Include top 30% each of checklists and environmental packages in the combinations? Build time = 10 minutes.

Top v6 checklists of Mid July

checklist count
MIMARKS.survey 799118
MIMS.me 623687
MIGS.eu 194590
MIMARKS.specimen 180969
MIMAG 141059
MIGS.ba 117192
MISAG 17395
MIGS.vi 6830
MIUVIG 1964

Top v6 environmental packages of Mid July

environmental package count
host-associated 420604
human-gut 310529
soil 225613
plant-associated 173276
water 168886
human-associated 154794
human-oral 74204
miscellaneous 73059
sediment 61867
wastewater 53985
human-vaginal 47707
human-skin 36217
microbial 19882
built 11253
air 7785
riculture 672
agriculture 667
food-human_foods 598
food-farm_env 594
symbiont-associated 399
food-animal 276
food-prod_facility 94

This was referenced Jul 27, 2023
Merged
Closed
Open
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@turbomam