array parameter 2d plot axis choice #266

nataliejpg · 2016-07-20T12:04:25Z

Steps to reproduce

Take data for a 2d plot with an array type parameter (aka 'multidimensional' or 'hard', for me this is the trace data from a VNA - see #243)
eg sweep time and take trace every second
plot it using MatPlot or QtPlot specifying x y and z variables
ie
qc.MatPlot(data.VNA_time, data.VNA_frequency, data.VNA_magnitude)
instead of just
qc.MatPlot(data.VNA_magnitude)

Expected behaviour

Would expect the plot to have x axis time, y axis frequency and colour plot magnitude

Actual behaviour

In MatPlot it gives an error:

In QtPlot It writes the correct names on the axes but doesnt transpose the plot and makes up values for the axes to correspond to the shape
ie qc.MatPlot(data.VNA_magnitude) gives

and qc.MatPlot(data.VNA_time, data.VNA_frequency, data.VNA_magnitude) gives

Same system works fine for 1d plot axis switching in tutorial notebook

System

T5 (windows)
driver/rohde_schwarz_ZNB20

The text was updated successfully, but these errors were encountered:

MerlinSmiles · 2016-07-20T12:57:30Z

I ran into the same thing, and ended up ignoring it because it failed, then I forgot about this :( .

The problem is:
The z-array is a 2d-array.
The x, and y axes in the plot are just rescaled/relabeled from the xy arrays.
The plot then just plots the data as pixels. If the rescaling of x or y failed to the number of points on z, it wil revert to only show the index, which is why your x-axis has 200 points in your second screenshot, while it had 50 points on y in your first plot.

@alexcjohnson Is this understanding correct?

@alexcjohnson @giulioungaretti I think this is a bug that needs a fix before release.

nataliejpg · 2016-07-20T13:07:37Z

Thanks Merlin. I did notice how my axis just rescaled themselves to fit the pixels (which is pretty funny) but you definitely have a better understanding. Definitely agree that this should be fixed before release

giulioungaretti · 2016-07-20T13:10:49Z

and @nataliejpg 🍷 for a superb bug report!

MerlinSmiles · 2016-07-20T13:10:56Z

Its always good to have funny times... :)

I was playing around with interpolating data onto a grid a little while ago, and just checked it. That one takes care of realigning x and y correctly, however, we wont want to interpolate in all cases, especially not when we have x and y as setpoints...

4754: Update pytest-asyncio requirement from ~=0.19.0 to ~=0.20.1 r=jenshnielsen a=dependabot[bot] Updates the requirements on [pytest-asyncio](https://github.com/pytest-dev/pytest-asyncio) to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/pytest-dev/pytest-asyncio/releases">pytest-asyncio's releases</a>.</em></p> <blockquote> <h2>pytest-asyncio 0.20.1</h2> <hr /> <h2>title: 'pytest-asyncio: pytest support for asyncio'</h2> <p><a href="https://pypi.python.org/pypi/pytest-asyncio"><img src="https://img.shields.io/pypi/v/pytest-asyncio.svg" alt="image" /></a></p> <p><a href="https://github.com/pytest-dev/pytest-asyncio/actions?workflow=CI"><img src="https://github.com/pytest-dev/pytest-asyncio/workflows/CI/badge.svg" alt="image" /></a></p> <p><a href="https://codecov.io/gh/pytest-dev/pytest-asyncio"><img src="https://codecov.io/gh/pytest-dev/pytest-asyncio/branch/master/graph/badge.svg" alt="image" /></a></p> <p><a href="https://github.com/pytest-dev/pytest-asyncio"><img src="https://img.shields.io/pypi/pyversions/pytest-asyncio.svg" alt="Supported Python versions" /></a></p> <p><a href="https://github.com/ambv/black"><img src="https://img.shields.io/badge/code%20style-black-000000.svg" alt="image" /></a></p> <p>pytest-asyncio is an Apache2 licensed library, written in Python, for testing asyncio code with pytest.</p> <p>asyncio code is usually written in the form of coroutines, which makes it slightly more difficult to test using normal testing tools. pytest-asyncio provides useful fixtures and markers to make testing easier.</p> <pre lang="{.sourceCode" data-meta=".python}"><code>`@pytest.mark.asyncio` async def test_some_asyncio_code(): res = await library.do_something() assert b"expected result" == res </code></pre> <p>pytest-asyncio has been strongly influenced by <a href="https://github.com/eugeniy/pytest-tornado">pytest-tornado</a>.</p> <h1>Features</h1> <ul> <li>fixtures for creating and injecting versions of the asyncio event loop</li> <li>fixtures for injecting unused tcp/udp ports</li> <li>pytest markers for treating tests as asyncio coroutines</li> <li>easy testing with non-default event loops</li> <li>support for [async def]{.title-ref} fixtures and async generator fixtures</li> <li>support <em>auto</em> mode to handle all async fixtures and tests automatically by asyncio; provide <em>strict</em> mode if a test suite should work with different async frameworks simultaneously, e.g. <code>asyncio</code> and <code>trio</code>.</li> </ul> <h1>Installation</h1>  </blockquote> <p>... (truncated)</p> </details> <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/pytest-dev/pytest-asyncio/blob/master/CHANGELOG.rst">pytest-asyncio's changelog</a>.</em></p> <blockquote> <h1>0.20.1 (22-10-21)</h1> <ul> <li>Fixes an issue that warned about using an old version of pytest, even though the most recent version was installed. <code>[#430](pytest-dev/pytest-asyncio#430) <https://github.com/pytest-dev/pytest-asyncio/issues/430></code>_</li> </ul> <h1>0.20.0 (22-10-21)</h1> <ul> <li>BREAKING: Removed <em>legacy</em> mode. If you're upgrading from v0.19 and you haven't configured <code>asyncio_mode = legacy</code>, you can upgrade without taking any additional action. If you're upgrading from an earlier version or you have explicitly enabled <em>legacy</em> mode, you need to switch to <em>auto</em> or <em>strict</em> mode before upgrading to this version.</li> <li>Deprecate use of pytest v6.</li> <li>Fixed an issue which prevented fixture setup from being cached. <code>[#404](pytest-dev/pytest-asyncio#404) <https://github.com/pytest-dev/pytest-asyncio/pull/404></code>_</li> </ul> <h1>0.19.0 (22-07-13)</h1> <ul> <li>BREAKING: The default <code>asyncio_mode</code> is now <em>strict</em>. <code>[#293](pytest-dev/pytest-asyncio#293) <https://github.com/pytest-dev/pytest-asyncio/issues/293></code>_</li> <li>Removes <code>setup.py</code> since all relevant configuration is present <code>setup.cfg</code>. Users requiring an editable installation of pytest-asyncio need to use pip v21.1 or newer. <code>[#283](pytest-dev/pytest-asyncio#283) <https://github.com/pytest-dev/pytest-asyncio/issues/283></code>_</li> <li>Declare support for Python 3.11.</li> </ul> <h1>0.18.3 (22-03-25)</h1> <ul> <li>Adds <code>pytest-trio <https://pypi.org/project/pytest-trio/></code>_ to the test dependencies</li> <li>Fixes a bug that caused pytest-asyncio to try to set up async pytest_trio fixtures in strict mode. <code>[#298](pytest-dev/pytest-asyncio#298) <https://github.com/pytest-dev/pytest-asyncio/issues/298></code>_</li> </ul> <h1>0.18.2 (22-03-03)</h1> <ul> <li>Fix asyncio auto mode not marking static methods. <code>[#295](pytest-dev/pytest-asyncio#295) <https://github.com/pytest-dev/pytest-asyncio/issues/295></code>_</li> <li>Fix a compatibility issue with Hypothesis 6.39.0. <code>[#302](pytest-dev/pytest-asyncio#302) <https://github.com/pytest-dev/pytest-asyncio/issues/302></code>_</li> </ul> <h1>0.18.1 (22-02-10)</h1> <ul> <li>Fixes a regression that prevented async fixtures from working in synchronous tests. <code>[#286](pytest-dev/pytest-asyncio#286) <https://github.com/pytest-dev/pytest-asyncio/issues/286></code>_</li> </ul> <h1>0.18.0 (22-02-07)</h1> <ul> <li>Raise a warning if <a href="https://github.com/pytest"><code>`@pytest</code></a>.mark.asyncio` is applied to non-async function. <code>[#275](pytest-dev/pytest-asyncio#275) <https://github.com/pytest-dev/pytest-asyncio/issues/275></code>_</li> <li>Support parametrized <code>event_loop</code> fixture. <code>[#278](pytest-dev/pytest-asyncio#278) <https://github.com/pytest-dev/pytest-asyncio/issues/278></code>_</li> </ul> <h1>0.17.2 (22-01-17)</h1> <ul> <li>Require <code>typing-extensions</code> on Python`_</li> <li>Fix a regression in tests collection introduced by 0.17.1, the plugin works fine with non-python tests again. <code>[#267](pytest-dev/pytest-asyncio#267) <https://github.com/pytest-dev/pytest-asyncio/issues/267></code>_</li> </ul> <h1>0.17.1 (22-01-16)</h1> <ul> <li>Fixes a bug that prevents async Hypothesis tests from working without explicit <code>asyncio</code> marker when <code>--asyncio-mode=auto</code> is set. <code>[#258](pytest-dev/pytest-asyncio#258) <https://github.com/pytest-dev/pytest-asyncio/issues/258></code>_</li> <li>Fixed a bug that closes the default event loop if the loop doesn't exist <code>[#257](pytest-dev/pytest-asyncio#257) <https://github.com/pytest-dev/pytest-asyncio/issues/257></code>_</li> <li>Added type annotations. <code>[#198](pytest-dev/pytest-asyncio#198) <https://github.com/pytest-dev/pytest-asyncio/issues/198></code>_</li> <li>Show asyncio mode in pytest report headers. <code>[#266](pytest-dev/pytest-asyncio#266) <https://github.com/pytest-dev/pytest-asyncio/issues/266></code>_</li> <li>Relax <code>asyncio_mode</code> type definition; it allows to support pytest 6.1+. <code>[#262](pytest-dev/pytest-asyncio#262) <https://github.com/pytest-dev/pytest-asyncio/issues/262></code>_</li> </ul>  </blockquote> <p>... 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4754: Update pytest-asyncio requirement from ~=0.19.0 to ~=0.20.1 r=jenshnielsen a=dependabot[bot] Updates the requirements on [pytest-asyncio](https://github.com/pytest-dev/pytest-asyncio) to permit the latest version. <details> <summary>Release notes</summary> <p><em>Sourced from <a href="https://github.com/pytest-dev/pytest-asyncio/releases">pytest-asyncio's releases</a>.</em></p> <blockquote> <h2>pytest-asyncio 0.20.1</h2> <hr /> <h2>title: 'pytest-asyncio: pytest support for asyncio'</h2> <p><a href="https://pypi.python.org/pypi/pytest-asyncio"><img src="https://img.shields.io/pypi/v/pytest-asyncio.svg" alt="image" /></a></p> <p><a href="https://github.com/pytest-dev/pytest-asyncio/actions?workflow=CI"><img src="https://github.com/pytest-dev/pytest-asyncio/workflows/CI/badge.svg" alt="image" /></a></p> <p><a href="https://codecov.io/gh/pytest-dev/pytest-asyncio"><img src="https://codecov.io/gh/pytest-dev/pytest-asyncio/branch/master/graph/badge.svg" alt="image" /></a></p> <p><a href="https://github.com/pytest-dev/pytest-asyncio"><img src="https://img.shields.io/pypi/pyversions/pytest-asyncio.svg" alt="Supported Python versions" /></a></p> <p><a href="https://github.com/ambv/black"><img src="https://img.shields.io/badge/code%20style-black-000000.svg" alt="image" /></a></p> <p>pytest-asyncio is an Apache2 licensed library, written in Python, for testing asyncio code with pytest.</p> <p>asyncio code is usually written in the form of coroutines, which makes it slightly more difficult to test using normal testing tools. pytest-asyncio provides useful fixtures and markers to make testing easier.</p> <pre lang="{.sourceCode" data-meta=".python}"><code>`@pytest.mark.asyncio` async def test_some_asyncio_code(): res = await library.do_something() assert b"expected result" == res </code></pre> <p>pytest-asyncio has been strongly influenced by <a href="https://github.com/eugeniy/pytest-tornado">pytest-tornado</a>.</p> <h1>Features</h1> <ul> <li>fixtures for creating and injecting versions of the asyncio event loop</li> <li>fixtures for injecting unused tcp/udp ports</li> <li>pytest markers for treating tests as asyncio coroutines</li> <li>easy testing with non-default event loops</li> <li>support for [async def]{.title-ref} fixtures and async generator fixtures</li> <li>support <em>auto</em> mode to handle all async fixtures and tests automatically by asyncio; provide <em>strict</em> mode if a test suite should work with different async frameworks simultaneously, e.g. <code>asyncio</code> and <code>trio</code>.</li> </ul> <h1>Installation</h1>  </blockquote> <p>... (truncated)</p> </details> <details> <summary>Changelog</summary> <p><em>Sourced from <a href="https://github.com/pytest-dev/pytest-asyncio/blob/master/CHANGELOG.rst">pytest-asyncio's changelog</a>.</em></p> <blockquote> <h1>0.20.1 (22-10-21)</h1> <ul> <li>Fixes an issue that warned about using an old version of pytest, even though the most recent version was installed. <code>[#430](pytest-dev/pytest-asyncio#430) <https://github.com/pytest-dev/pytest-asyncio/issues/430></code>_</li> </ul> <h1>0.20.0 (22-10-21)</h1> <ul> <li>BREAKING: Removed <em>legacy</em> mode. If you're upgrading from v0.19 and you haven't configured <code>asyncio_mode = legacy</code>, you can upgrade without taking any additional action. If you're upgrading from an earlier version or you have explicitly enabled <em>legacy</em> mode, you need to switch to <em>auto</em> or <em>strict</em> mode before upgrading to this version.</li> <li>Deprecate use of pytest v6.</li> <li>Fixed an issue which prevented fixture setup from being cached. <code>[#404](pytest-dev/pytest-asyncio#404) <https://github.com/pytest-dev/pytest-asyncio/pull/404></code>_</li> </ul> <h1>0.19.0 (22-07-13)</h1> <ul> <li>BREAKING: The default <code>asyncio_mode</code> is now <em>strict</em>. <code>[#293](pytest-dev/pytest-asyncio#293) <https://github.com/pytest-dev/pytest-asyncio/issues/293></code>_</li> <li>Removes <code>setup.py</code> since all relevant configuration is present <code>setup.cfg</code>. Users requiring an editable installation of pytest-asyncio need to use pip v21.1 or newer. <code>[#283](pytest-dev/pytest-asyncio#283) <https://github.com/pytest-dev/pytest-asyncio/issues/283></code>_</li> <li>Declare support for Python 3.11.</li> </ul> <h1>0.18.3 (22-03-25)</h1> <ul> <li>Adds <code>pytest-trio <https://pypi.org/project/pytest-trio/></code>_ to the test dependencies</li> <li>Fixes a bug that caused pytest-asyncio to try to set up async pytest_trio fixtures in strict mode. <code>[#298](pytest-dev/pytest-asyncio#298) <https://github.com/pytest-dev/pytest-asyncio/issues/298></code>_</li> </ul> <h1>0.18.2 (22-03-03)</h1> <ul> <li>Fix asyncio auto mode not marking static methods. <code>[#295](pytest-dev/pytest-asyncio#295) <https://github.com/pytest-dev/pytest-asyncio/issues/295></code>_</li> <li>Fix a compatibility issue with Hypothesis 6.39.0. <code>[#302](pytest-dev/pytest-asyncio#302) <https://github.com/pytest-dev/pytest-asyncio/issues/302></code>_</li> </ul> <h1>0.18.1 (22-02-10)</h1> <ul> <li>Fixes a regression that prevented async fixtures from working in synchronous tests. <code>[#286](pytest-dev/pytest-asyncio#286) <https://github.com/pytest-dev/pytest-asyncio/issues/286></code>_</li> </ul> <h1>0.18.0 (22-02-07)</h1> <ul> <li>Raise a warning if <a href="https://github.com/pytest"><code>`@pytest</code></a>.mark.asyncio` is applied to non-async function. <code>[#275](pytest-dev/pytest-asyncio#275) <https://github.com/pytest-dev/pytest-asyncio/issues/275></code>_</li> <li>Support parametrized <code>event_loop</code> fixture. <code>[#278](pytest-dev/pytest-asyncio#278) <https://github.com/pytest-dev/pytest-asyncio/issues/278></code>_</li> </ul> <h1>0.17.2 (22-01-17)</h1> <ul> <li>Require <code>typing-extensions</code> on Python`_</li> <li>Fix a regression in tests collection introduced by 0.17.1, the plugin works fine with non-python tests again. <code>[#267](pytest-dev/pytest-asyncio#267) <https://github.com/pytest-dev/pytest-asyncio/issues/267></code>_</li> </ul> <h1>0.17.1 (22-01-16)</h1> <ul> <li>Fixes a bug that prevents async Hypothesis tests from working without explicit <code>asyncio</code> marker when <code>--asyncio-mode=auto</code> is set. <code>[#258](pytest-dev/pytest-asyncio#258) <https://github.com/pytest-dev/pytest-asyncio/issues/258></code>_</li> <li>Fixed a bug that closes the default event loop if the loop doesn't exist <code>[#257](pytest-dev/pytest-asyncio#257) <https://github.com/pytest-dev/pytest-asyncio/issues/257></code>_</li> <li>Added type annotations. <code>[#198](pytest-dev/pytest-asyncio#198) <https://github.com/pytest-dev/pytest-asyncio/issues/198></code>_</li> <li>Show asyncio mode in pytest report headers. <code>[#266](pytest-dev/pytest-asyncio#266) <https://github.com/pytest-dev/pytest-asyncio/issues/266></code>_</li> <li>Relax <code>asyncio_mode</code> type definition; it allows to support pytest 6.1+. <code>[#262](pytest-dev/pytest-asyncio#262) <https://github.com/pytest-dev/pytest-asyncio/issues/262></code>_</li> </ul>  </blockquote> <p>... (truncated)</p> </details> <details> <summary>Commits</summary> <ul> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/c8d017407d39dd81d6864fa9a58ba1240d54be9f"><code>c8d0174</code></a> fix: Do not warn about outdated pytest version when pytest>=7 is installed. (...</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/6450ddbe974f5359d56317ba8bdda8b2ab48655a"><code>6450ddb</code></a> Prepare release of v0.20.0. (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/428">#428</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/150f29c107fbd76641de47e040d43840769ef92c"><code>150f29c</code></a> Build(deps): Bump hypothesis in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/427">#427</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/adc88090f341d9872e9e9b4d22a94cdadf60b3bc"><code>adc8809</code></a> Build(deps): Bump typing-extensions in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/425">#425</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/4abf9d1df228ed8b083721d7affa73e4a08d13c3"><code>4abf9d1</code></a> Build(deps): Bump zipp from 3.8.1 to 3.9.0 in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/424">#424</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/eb487bcb076f44dedcdb33e74972bf06c37027ee"><code>eb487bc</code></a> Build(deps): Bump hypothesis in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/423">#423</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/907c461f172e52159a595e2592176c7feac04a43"><code>907c461</code></a> Refactor pytest_pycollect_makeitems (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/421">#421</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/d45ab217c80117854b510edc6c9fdd457b6b07fc"><code>d45ab21</code></a> feat: Add deprecation warning for pytest < 7. (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/420">#420</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/cab20f4d346e9e52e5ffc93854de3ec881e7d342"><code>cab20f4</code></a> Build(deps): Bump importlib-metadata in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/415">#415</a>)</li> <li><a href="https://github.com/pytest-dev/pytest-asyncio/commit/d9f77567189c96536b39b43520f4b40895b34fb9"><code>d9f7756</code></a> Build(deps): Bump hypothesis in /dependencies/default (<a href="https://github-redirect.dependabot.com/pytest-dev/pytest-asyncio/issues/416">#416</a>)</li> <li>Additional commits viewable in <a href="https://github.com/pytest-dev/pytest-asyncio/compare/v0.19.0...v0.20.1">compare view</a></li> </ul> </details> <br /> You can trigger a rebase of this PR by commenting ``@dependabot` rebase`. 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nataliejpg added the bug label Jul 20, 2016

giulioungaretti added the p1 label Jul 20, 2016

giulioungaretti added this to the V0.1 milestone Jul 20, 2016

MerlinSmiles mentioned this issue Jul 29, 2016

Feature/qt plot #290

Closed

giulioungaretti modified the milestone: v0.1 colossal cleanup Oct 25, 2016

MerlinSmiles mentioned this issue Nov 15, 2016

Feature/qt_plot_2 #387

Closed

astafan8 removed the p1 label Aug 14, 2018

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array parameter 2d plot axis choice #266

array parameter 2d plot axis choice #266

nataliejpg commented Jul 20, 2016

MerlinSmiles commented Jul 20, 2016

nataliejpg commented Jul 20, 2016

giulioungaretti commented Jul 20, 2016

MerlinSmiles commented Jul 20, 2016

array parameter 2d plot axis choice #266

array parameter 2d plot axis choice #266

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nataliejpg commented Jul 20, 2016

Steps to reproduce

Expected behaviour

Actual behaviour

System

MerlinSmiles commented Jul 20, 2016

nataliejpg commented Jul 20, 2016

giulioungaretti commented Jul 20, 2016

MerlinSmiles commented Jul 20, 2016