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ENH: Refactor DeepMIL modules to support slide dataloader #304

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merged 125 commits into from
Apr 21, 2022

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@kenza-bouzid kenza-bouzid commented Apr 14, 2022

Refactor DeepMIL modules to support loading data with SlidesDataModule.

Main contributions include:

  • Refactoring of DeepMILModule into BaseDeepMILModule, TilesDeepMILModule and SlidesDeepMILModule
  • Refactoring of deepmil containers with multi inheritance
  • Update mock data generators
  • Unit test for slide based mock panda slides deep smile

@kenza-bouzid kenza-bouzid marked this pull request as ready for review April 20, 2022 16:38
@kenza-bouzid kenza-bouzid changed the title ENH: DRAFT Refactor DeepMIL modules to support slide dataloader ENH: Refactor DeepMIL modules to support slide dataloader Apr 20, 2022
@kenza-bouzid kenza-bouzid merged commit 39911d2 into main Apr 21, 2022
@kenza-bouzid kenza-bouzid deleted the kenzab/wsi_deepmil_v0 branch April 21, 2022 16:48
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3 participants