TEST: Incorporate additional smoke tests

[mebristo]

Incorporate additional smoke tests into the PR github workflow

This currently does not include the smoke test for TcgaCrckSSLMIL since we first must include a way to provide custom SSL checkpoint

[codecov]

Codecov Report

Merging #532 (7515724) into main (87237db) will not change coverage.
The diff coverage is n/a.

Flag	Coverage Δ
hi-ml-cpath	77.43% <ø> (ø)

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[ant0nsc]

Looking good in terms of functionality. But there's some opportunity for removing duplication in the YAML files now, to increase long term maintainability of the tests. Move some of the repeated bits to a Github action or a Makefile?

[mebristo]

Looking good in terms of functionality. But there's some opportunity for removing duplication in the YAML files now, to increase long term maintainability of the tests. Move some of the repeated bits to a Github action or a Makefile?

Good point. Have added a GH action to replace the duplicate code

[peterhessey]

LGTM :)