- Hi, This is Yang Zhang 👋🏻 (miemiemmmm 🐑🐏🐑🐏)
- I’m interested in Computer-aided Drug Design with the assistance of molecular dynamics simulations and machine learning.
- Actively exploring the convergence of physics-based and data-driven methods in drug discovery.
- Proactively comparing oranges 🍊 with apples 🍎 and trying to characterize the differences between them.
- A string of apples 🍎 means that the tree is likely to be an apple tree 🌳, but it is not always the case.
- Could be a basket 🧺 of apples hanging on a tree 🌳.
- Could also be someone having picnic under the tree 🌳 with apple🍎, orange🍊, banana🍌, and grapes🍇.
- But if a tree showcases apple blossoms swaying in the wind🌬️, young apples maturing under moonlight🌙, fledgling fruits enduring rain🌧️, and emits a rosy fragrance🌸, it is confident to be an apple tree 🍎🌳.
- This is also the same case for drug discovery.
✨ Computational Chemistry Tools:
Molecular Dynamics: Gromacs, Amber, OpenMM, CAMPARI
Trajectory Analysis: Pytraj, Cpptraj, MDTraj, MMGBSA
Ligand Parameterization: CGenFF, Antechamber
Cheminformatics Computation: Openbabel, RDKit, OpenEye
Molecular Visualization and Modelling: UCSF Chimera, MOE, PyMol, ACGui
Molecular Docking: SEED, AutoDock Vina, OpenEye FRED, Gold
✨ Programming Languages:
Python ⣿⣿⣿⣿⣿⣿⣿⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 40%
C++ ⣿⣿⣿⣿⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 25%
Shell ⣿⣿⣿⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 20%
JavaScript ⣿⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 10%
HTML/CSS ⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 3%
SQL ⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 2%
✨ Operating System:
Linux ⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣿⣀⣀⣀⣀ 80%
Windows ⣿⣿⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 15%
Mac ⣿⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀⣀ 5%
💬Also find me at: