first commit

.gitignore

@@ -0,0 +1,14 @@
+# temporary files
+*~
+.*.swp # vim
+*.flc # xemacs
+.DS_Store # MacOS
+Thumbs.db # Windows
+
+
+# removing dist folder : folder receiving the compilation products
+/dist
+/.build
+
+/python/sequenceParser.py
+/python/sequenceParser_wrap.cxx

INSTALL

@@ -0,0 +1,63 @@
+sequenceParser - install HOWTO
+
+
+Why Boost.Build ?
+=================
+
+    sequenceParser relies heavily on the Boost library, so instead of using one of
+    the many multiplatform build system available like Scons, CMake, Autotools
+    we're simply using Boost.Build, the build system embedded within Boost.
+
+    Boost.Build is powerful yet very expressive and terse. It's a weapon of
+    choice when building large pieces of code with a lot of dependencies.
+
+    An excellent introduction to Boost.Build can be found here
+    http://www.highscore.de/cpp/boostbuild/
+
+    And the official documentation is available online
+    http://www.boost.org/boost-build2/doc/html/
+    or in your boost copy at $(BOOST_ROOT)/tools/build/index.html 
+
+
+Setting up the build process
+============================
+
+    * Building the building tool (the build-ception...)
+
+        - First grab Boost from the website ( http://www.boost.org/ )
+        - Uncompress the archive somewhere.
+        - Open a terminal and go to the boost root folder, then type
+            Linux / MacOsX  : ./bootstrap.sh
+            Windows         : bootstrap.bat
+
+        This will generate a 'b2' executable.
+
+    * Setting up environment variables
+
+        In order to use Boost.Build you have to set the BOOST_ROOT
+        environment variable.
+
+            Linux / MacOsX  : export BOOST_ROOT=/your/path/to/boost/root
+            Windows         : set BOOST_ROOT=C:\your\path\to\boost\root
+
+        Note : You can add it to your ~/.bashrc, ~/.profile
+        or to your Windows environment to make it persistent.
+
+
+Building
+========
+
+    * Choose the appropriate script depending on your platform
+            Linux   : ./build-linux-gcc.sh 
+            MacOSX  : comming soon 
+            Windows : comming soon
+
+    * Run it with one or more of the following command line arguments
+        --help               : Display help message
+        --clean              : Remove targets instead of building
+        variant=release      : build the release version ( by default is the debug version )
+
+                             : without argument, full build & installation (without unit test)
+        sequenceLibrary      : Build only the C++ library
+        test                 : Build & run unit test suite
+

Jamroot

@@ -0,0 +1,83 @@
+
+import type ;
+
+local BOOST_ROOT = [ modules.peek : BOOST_ROOT ] ;
+
+use-project /boost : $(BOOST_ROOT) ;
+use-project /test  : test ;
+
+if ! [ type.registered BINDINGPYTHON ]
+{
+	type.register BINDINGPYTHON : : SHARED_LIB ;
+	type.change-generated-target-prefix BINDINGPYTHON  : : "_" ;
+}
+
+project
+	: requirements
+		<include>src
+		<include>include
+		<library>/boost//system
+		<library>/boost//filesystem
+		<library>/boost//regex
+	: usage-requirements
+		<include>include
+		<library>/boost//system
+		<library>/boost//filesystem
+		<library>/boost//regex
+	:
+		build-dir .build/
+	;
+
+lib sequence
+	:
+		[ glob src/*.cpp ]
+	;
+
+make buildBindingSwig : python/sequenceParser.i : @swigCpptoPython ;
+actions swigCpptoPython
+{
+	swig -c++ -python -I. $(>)
+}
+
+bindingpython sequenceParser
+	:
+		[ glob python/*.cxx ]
+		sequence
+		/python
+	:
+		<include>.
+	;
+
+install sequenceLibrary
+	:
+		sequence
+	:
+		<install-dependencies>on
+		<install-type>SHARED_LIB
+		<variant>debug:<location>dist/debug
+		<variant>release:<location>dist/release
+	;
+
+install bindingPython
+	:
+		[ glob python/sequenceParser.py ]
+	:
+		<variant>debug:<location>dist/debug
+		<variant>release:<location>dist/release
+	;
+
+install bindingPythonLibrary
+	:
+		sequenceParser
+	:
+		<variant>debug:<location>dist/debug
+		<variant>release:<location>dist/release
+		<install-dependencies>off
+		<install-type>BINDINGPYTHON
+
+	;
+
+
+
+
+explicit test ;