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I think this should be fixed in the develop branch now - I've tried to more accurately emulate console behaviour.
In general, it's probably safer to always end a trace string with \n if possible, since that's essentially what triggers printing to the console. I've now changed it so that a new line in stdout will trigger the printing of anything left in stderr, which is more similar to what happens on the command line.
When running the MiniZinc IDE, trace is not printed for me unless the model is unsat.
gives
but uncommenting the second constraint gives
When I run the model (without the second constraint) via the command-line I get:
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