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Cutting atlases out of mni_atlas_reader #4

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rmarkello opened this issue Aug 7, 2018 · 5 comments
Open

Cutting atlases out of mni_atlas_reader #4

rmarkello opened this issue Aug 7, 2018 · 5 comments
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@rmarkello
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There was some talk here at the hackathon about trying to splice the atlases out of the current repository and make them into their own repository, which could serve as a very useful resource for anyone looking for brain atlases! This question was previously raised on the BIDS Discussion List and some relevant discussion occurred there.

@PeerHerholz mentioned that Lead DBS has already collected a good number of atlases which might be a good place to start!

What are peoples' thoughts? Should a new repo be created to host atlases (this package could then grab that repo as additional "package data" when downloaded!). If so, what should the name be? @miykael

@PeerHerholz
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Awesome idea @rmarkello.
For ALPACA I started something like a summary, containing information on atlas name, type, ROIs/regions & license. You can check it here. Maybe that would be useful? Furthermore, something like that would easily be transferred to a website, eh?

@miykael
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miykael commented Aug 7, 2018

@rmarkello - Yes, I think it should be split from this project.
@PeerHerholz - Oh my god!! That's already perfect.

I think it makes sense to have a new repo where all of this can be combined. Anybody has any idea for such a repo?

@rmarkello
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Not my idea! All credit to @chrisfilo and @miykael. I love the markdown table, though! That'll be a great launching pad.

I'm deeply terrible at naming, but will happily vote on other suggestions!

@miykael
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miykael commented Aug 7, 2018

At lunch we came up with Corgi - cortical generalized inventory or something lile this.

@chrisgorgo
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chrisgorgo commented Aug 7, 2018 via email

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