docker-modflow

Docker implementation of MODFLOW-2005-v.1.11.00

Based on source code for Unix file structure

Pull the precompiled image from Docker Hub

The docker image is automatically built on commit to this repository at Docker hub. Docker Hub is a cloud hosted service from Docker that provides registry capabilities for public and private content. Learn more about Docker and Docker Hub.

docker pull mjstealey/docker-modflow

Usage:

Invoke mf2005 MYFILE.nam execution where MYFILE.nam = name of the MODFLOW name file for the simulation. This is achieved by sharing your local MODFLOW input files from a directory on the host that we'll call /LOCALPATH, and the docker-modflow instance will mount this as /workspace internally. The resulting output .lst file will be written to the shared /LOCALPATH directory.

docker run --rm --env-file sample-env-file.env -v /LOCALPATH:/workspace mjstealey/docker-modflow mf2005 MYFILE.nam 

• Sample environment file sample-env-file.env (Update as required for your installation)

  WORKER_UID=
  WORKER_GID=
  

  About UID/GID: The docker container will operate as the root user if both the WORKER_UID and WORKER_GID variables are left blank. If these variables are defined, the container will operate a worker user with the specified UID and GID. If only one varialbe is set the container will operate as a worker user and default the unset UID or GID to a value of 999. This is useful when operating on a system where read/write permissions of a shared volume on the host need to be respected.

Example 1: Say we want to run a set of input files where the name file is bcf2ss.nam and it's located within our local directory /mydirectory.

$ ls /mydirectory/ -1
bcf2ss.ba6
bcf2ss.bc6
bcf2ss.dis
bcf2ss.nam
bcf2ss.oc
bcf2ss.pcg
bcf2ss.rch
bcf2ss.riv
bcf2ss.wel

We can invoke the call by mapping the shared volume as -v /mydirectory:/workspace and specify the execution of MODFLOW on our bcf2ss.nam as mf2005 bcf2ss.nam in the following way: (The container will operate as root since WORKER_UID and WORKER_GID were not specified, thus all output files will be owned by root)

$ docker run --rm -v /mydirectory:/workspace mjstealey/docker-modflow mf2005 bcf2ss.nam

                                  MODFLOW-2005
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013

 Using NAME file: bcf2ss.nam
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/27 18:29:16

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     1    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/27 18:29:16
 Elapsed run time:  0.013 Seconds

  Normal termination of simulation

Upon successful completion the user will now find the resultant bcf2ss.lst output file in their local /mydirectory.

$ ls /mydirectory/ -1
bcf2ss.ba6
bcf2ss.bc6
bcf2ss.dis
bcf2ss.lst    <-- Output file
bcf2ss.nam
bcf2ss.oc
bcf2ss.pcg
bcf2ss.rch
bcf2ss.riv
bcf2ss.wel

---

Example 2: Say we want to run a set of input files where the name file is UZFtest2.nam and it's located within our local directory /mydirectory, and we want to enforce ownership of the output files to a local user with UID=1000 and GID=1000.

$ ls /mydirectory/ -1
UZFtest2.ba6
UZFtest2.dis
UZFtest2.gag
UZFtest2.ghb
UZFtest2.lpf
UZFtest2.nam
UZFtest2.oc
UZFtest2.sfr
UZFtest2.sip
UZFtest2.uzf
UZFtest2.wel

Set sample-env-file.env as:

WORKER_UID=1000
WORKER_GID=1000

We can invoke the call by mapping the shared volume as -v /mydirectory:/workspace and specify the execution of MODFLOW on our UZFtest2.nam as mf2005 UZFtest2.nam in the following way:

$ docker run --rm --env-file sample-env-file.env -v /mydirectory:/workspace mjstealey/docker-modflow mf2005 UZFtest2.nam

                                  MODFLOW-2005
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013

 Using NAME file: UZFtest2.nam
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/27 18:20:26

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     4    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     5    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     6    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     7    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     8    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     9    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:    10    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:    11    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:    12    Time step:    15    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/27 18:20:33
 Elapsed run time:  7.625 Seconds

  Normal termination of simulation

Upon successful completion the user will now find the resultant output files in their local /mydirectory with the resultant output file onwership set to UID=1000 and GID=1000.

$ ls /mydirectory/ -1
UZFtest2.ba6
UZFtest2.dis
UZFtest2dv.sg9  <-- Output file
UZFtest2.flw    <-- Output file
UZFtest2.gag
UZFtest2.ghb
UZFtest2hd.out  <-- Output file
UZFtest2.lpf
UZFtest2.lst    <-- Output file
UZFtest2.nam
UZFtest2.oc
UZFtest2.sfr
UZFtest2.sg1    <-- Output file
UZFtest2.sg2    <-- Output file
UZFtest2.sg3    <-- Output file
UZFtest2.sg4    <-- Output file
UZFtest2.sg5    <-- Output file
UZFtest2.sg6    <-- Output file
UZFtest2.sg7    <-- Output file
UZFtest2.sg8    <-- Output file
UZFtest2.sip
UZFtest2.uzf
UZFtest2.uzf1   <-- Output file
UZFtest2.uzf2   <-- Output file
UZFtest2.uzf3   <-- Output file
UZFtest2.uzf4   <-- Output file
UZFtest2.uzfot  <-- Output file
UZFtest2.wel

Alternately environment variables can be passed into the docker run call as arguments instead of using an environment file. Using the same example UID=1000, GID=1000 we would make the docker run call like this:

$ docker run --rm \
  -e WORKER_UID=1000 \
  -e WORKER_GID=1000 \
  -v /mydirectory:/workspace \
  mjstealey/docker-modflow mf2005 UZFtest2.nam

---

Validation of the model: To test the validity of the model we will iterate over all .nam files found in the test-run directory If the container is run without any additional parameters. Samples of the expected output .lst files are found in the test-out directory and can be used for comparison as needed.

docker run --rm mjstealey/docker-modflow

Example 3: This is the output that would be recieved by the user in the console if the docker-modflow container were invoked without any additional parameters.

$ docker run --rm mjstealey/docker-modflow

### RUNNING TESTS ###
RUN: MNW2-Fig28.nam

                                  MODFLOW-2005     
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013                        

 Using NAME file: MNW2-Fig28.nam 
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 21:54:45

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:    12    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:00:00
 Elapsed run time:  5 Minutes, 14.424 Seconds

  Normal termination of simulation
RUN: UZFtest2.nam

                                  MODFLOW-2005     
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013                        

 Using NAME file: UZFtest2.nam 
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:00:00

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     4    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     5    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     6    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     7    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     8    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:     9    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    10    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    11    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    12    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    13    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    14    Ground-Water Flow Eqn.
 Solving:  Stress period:     2    Time step:    15    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     1    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     2    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     3    Ground-Water Flow Eqn.
 Solving:  Stress period:     3    Time step:     4    Ground-Water Flow Eqn.
...
...
RUN: twri.nam

                                  MODFLOW-2005     
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013                        

 Using NAME file: twri.nam 
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13
 Elapsed run time:  0.005 Seconds

  Normal termination of simulation
RUN: twrihfb.nam

                                  MODFLOW-2005     
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013                        

 Using NAME file: twrihfb.nam 
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13
 Elapsed run time:  0.005 Seconds

  Normal termination of simulation
RUN: twrip.nam

                                  MODFLOW-2005     
    U.S. GEOLOGICAL SURVEY MODULAR FINITE-DIFFERENCE GROUND-WATER FLOW MODEL
                             Version 1.11.00 8/8/2013                        

 Using NAME file: twrip.nam 
 Run start date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13

 Solving:  Stress period:     1    Time step:     1    Ground-Water Flow Eqn.
 Run end date and time (yyyy/mm/dd hh:mm:ss): 2016/09/23 22:02:13
 Elapsed run time:  0.005 Seconds

  Normal termination of simulation

In this example the output files are not stored to the host because there was no directory shared with the docker container. The generated output files would only be visibile within the container, and would be destroyed when the container process is terminated.