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1. 2d-rna-analysis 2d-rna-analysis Public

   Repository of tools for 2D structure analysis and 2D prediction methods benchamrking

   Jupyter Notebook

2. DiffLinker DiffLinker Public

   Forked from igashov/DiffLinker

   DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design

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3. bgsu-3D-processing bgsu-3D-processing Public

   Repository to store scripts for structure processing from BGSU RNA 3D motif atlas.

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4. RNA-GNN RNA-GNN Public

   Forked from XieResearchGroup/Physics-aware-Multiplex-GNN

   Code for our Nature Scientific Reports paper "A universal framework for accurate and efficient geometric deep learning of molecular systems"

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5. RNADiff RNADiff Public

   Forked from blt2114/ProtDiff_SMCDiff

   Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/abs/2206.04119

   Jupyter Notebook