Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix contour plot on run comparison page #4940

Merged
merged 3 commits into from
Oct 26, 2021

Conversation

harupy
Copy link
Member

@harupy harupy commented Oct 25, 2021

Signed-off-by: harupy 17039389+harupy@users.noreply.github.com

What changes are proposed in this pull request?

How is this patch tested?

  • Manually verify the plot works correctly
  • Unit tests

Before (master branch)

contour-issue-before.mov
  • plotly tries to draw the contour plot with p1, p2, and m1, but fails because p1 has a single unique value: 0 (see the error message on the console). The contour plot seems to require at least two data points on each axis.
  • plotly keeps failing to draw the plot even if we pass valid data.
  • Note this issue occurs when we use scattergl (on this line). The plot gets drawn successfully with scatter. I haven't taken a look at the internal implementation of plotly, but it looks like using scattergl changes how plotly updates the plot state.

After

contour-issue-after.mov
  • The fix is to avoid drawing the plot if we know the data to plot doesn't enough data points.
  • Showing a warning message is more helpful than showing an empty plot?

Code to generate test data

import mlflow

with mlflow.start_run():
    mlflow.log_param("p1", 0)
    mlflow.log_param("p2", 0.14427203773889796)
    mlflow.log_param("m1", 0)
    mlflow.log_metric("m2", 0.815)

with mlflow.start_run():
    mlflow.log_param("p1", 0)
    mlflow.log_param("p2", 0.17649088560647586)
    mlflow.log_param("m1", 0)
    mlflow.log_metric("m2", 0.269)

with mlflow.start_run():
    mlflow.log_param("p1", 0)
    mlflow.log_param("p2", 0.5324973999849046)
    mlflow.log_param("m1", 0)
    mlflow.log_metric("m2", 0.414)

Release Notes

Is this a user-facing change?

  • No. You can skip the rest of this section.
  • Yes. Give a description of this change to be included in the release notes for MLflow users.

(Details in 1-2 sentences. You can just refer to another PR with a description if this PR is part of a larger change.)

What component(s), interfaces, languages, and integrations does this PR affect?

Components

  • area/artifacts: Artifact stores and artifact logging
  • area/build: Build and test infrastructure for MLflow
  • area/docs: MLflow documentation pages
  • area/examples: Example code
  • area/model-registry: Model Registry service, APIs, and the fluent client calls for Model Registry
  • area/models: MLmodel format, model serialization/deserialization, flavors
  • area/projects: MLproject format, project running backends
  • area/scoring: MLflow Model server, model deployment tools, Spark UDFs
  • area/server-infra: MLflow Tracking server backend
  • area/tracking: Tracking Service, tracking client APIs, autologging

Interface

  • area/uiux: Front-end, user experience, plotting, JavaScript, JavaScript dev server
  • area/docker: Docker use across MLflow's components, such as MLflow Projects and MLflow Models
  • area/sqlalchemy: Use of SQLAlchemy in the Tracking Service or Model Registry
  • area/windows: Windows support

Language

  • language/r: R APIs and clients
  • language/java: Java APIs and clients
  • language/new: Proposals for new client languages

Integrations

  • integrations/azure: Azure and Azure ML integrations
  • integrations/sagemaker: SageMaker integrations
  • integrations/databricks: Databricks integrations

How should the PR be classified in the release notes? Choose one:

  • rn/breaking-change - The PR will be mentioned in the "Breaking Changes" section
  • rn/none - No description will be included. The PR will be mentioned only by the PR number in the "Small Bugfixes and Documentation Updates" section
  • rn/feature - A new user-facing feature worth mentioning in the release notes
  • rn/bug-fix - A user-facing bug fix worth mentioning in the release notes
  • rn/documentation - A user-facing documentation change worth mentioning in the release notes

Signed-off-by: harupy <17039389+harupy@users.noreply.github.com>
@github-actions github-actions bot added the rn/none List under Small Changes in Changelogs. label Oct 25, 2021
const maybeRenderPlot = () => {
if (xsSorted.length < 2 || ysSorted.length < 2) {
return (
<div>X or Y axis doesn't have enough unique data points to draw the contour plot</div>
Copy link
Member Author

@harupy harupy Oct 25, 2021

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Suggested change
<div>X or Y axis doesn't have enough unique data points to draw the contour plot</div>
<div>The contour plot requires at least two unique data points on the X and Y axes.</div>

Does this sound clearer?

Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

How about splitting the if-clause into 2 to improve the error message to indicate which axis it is?

Copy link
Member Author

@harupy harupy Oct 26, 2021

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks for the suggestion! Sounds good so the implementation should look like this, right?

Suggested change
<div>X or Y axis doesn't have enough unique data points to draw the contour plot</div>
const invalidAxes = [];
if (xsSorted.length < 2) {invalidAxes.push("X")}
if (ysSorted.length < 2) {invalidAxes.push("Y")}
if (invalidAxes.length > 0) {
const message = (
invalidAxes.length > 1 ?
`The ${invalidAxes.join("and")} axes don't` :
`The ${invalidAxes[0]} axis doesn't` :
)
return <div>{`${message}` enough data points to render the contour plot.}</div>
}

Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Nice!

);
}

return (
Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Which lines in this moved function is changed? Also why makes it a LazyPlot?

Copy link
Member Author

@harupy harupy Oct 26, 2021

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks for the comment. I just added the if clause right above to avoid attempting to render the plot with invalid data.

Copy link
Member Author

@harupy harupy Oct 26, 2021

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Also why makes it a LazyPlot?

It's because the original implementation uses LazyPlot?

@harupy harupy changed the title [WIP] Fix contour plot on run comparison page Fix contour plot on run comparison page Oct 26, 2021
const maybeRenderPlot = () => {
if (xsSorted.length < 2 || ysSorted.length < 2) {
return (
<div>X or Y axis doesn't have enough unique data points to draw the contour plot</div>
Copy link
Collaborator

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

How about splitting the if-clause into 2 to improve the error message to indicate which axis it is?

Signed-off-by: harupy <17039389+harupy@users.noreply.github.com>
Signed-off-by: harupy <17039389+harupy@users.noreply.github.com>
@jinzhang21 jinzhang21 merged commit a4b5b16 into mlflow:master Oct 26, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
rn/none List under Small Changes in Changelogs.
Projects
None yet
Development

Successfully merging this pull request may close these issues.

[BUG] Contour Plot render broken since 1.8
2 participants