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Denoising options for preprocessing #4

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larsoner opened this issue Mar 16, 2016 · 4 comments
Closed

Denoising options for preprocessing #4

larsoner opened this issue Mar 16, 2016 · 4 comments

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@larsoner
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From @teonbrooks and mne-tools/mne-python#2112:

It would be nice if we had some denoising options available for preprocessing data. A few options that I was thinking of tsPCA (Cheveigné, 2007), and CALM (Adachi, 2001), which can be a special case of tsPCA.

there's a package on git (https://github.com/pealco/python-meg-denoise) that contains an implementation, as well as source code (http://www.isr.umd.edu/Labs/CSSL/simonlab/Denoising.html).

use case for those whose lab implement these tools in Matlab, or private software, those don't have license for maxfilter but would like cleaner data.

@kingjr
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kingjr commented Mar 16, 2016

+1

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@teonbrooks
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+1

@larsoner
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Any volunteer to write it? Perhaps with DSS (#9) merged it will be easier if tsPCA requires some shared functions.

@larsoner
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I think we'll close in favor of the MEEGKit version

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