added primary

molikd · Jul 14, 2022 · 8056cb3 · 8056cb3
1 parent 8d914b8
commit 8056cb3
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/otb.sh b/otb.sh
@@ -177,6 +177,7 @@ if [ -n "$MODE" ]; then
     homozygous) RUN+="--mode=\"homozygous\" ";;
     heterozygous) RUN+="--mode=\"heterozygous\" ";;
     trio) RUN+="--mode=\"trio\" ";;
+    primary) RUN+="--mode=\"primary\" ";;
     *) error "mode set to $MODE, not an actual mode";;
   esac
 else