Put the new C++ back end in place for Python. #1077
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* Implement pickling for ForwardDemesGraph Python class. * ForwardDemesGraph now stores its demes.Graph * Pull in demes-rs dependencies from GitHub * remove some tests that rely on the deprecated API * Remove test decorator invoking DemographyDebugger * API updates for cpp_neutral_benchmark/cpp_neutral_benchmark.cc * When rounding leads to a bad model, return DemographyError rather than ValueError * Update examples/plugin/test_plugin.py * Fix C++ tests that were incorrect. These had to be changed b/c of errors we discovered upstream in demes-forward.
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molpopgen
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* Implement pickling for ForwardDemesGraph Python class. * ForwardDemesGraph now stores its demes.Graph * Pull in demes-rs dependencies from GitHub * remove some tests that rely on the deprecated API * Remove test decorator invoking DemographyDebugger * API updates for cpp_neutral_benchmark/cpp_neutral_benchmark.cc * When rounding leads to a bad model, return DemographyError rather than ValueError * Update examples/plugin/test_plugin.py * Fix C++ tests that were incorrect. These had to be changed b/c of errors we discovered upstream in demes-forward.
molpopgen
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Mar 7, 2023
* Implement pickling for ForwardDemesGraph Python class. * ForwardDemesGraph now stores its demes.Graph * Pull in demes-rs dependencies from GitHub * remove some tests that rely on the deprecated API * Remove test decorator invoking DemographyDebugger * API updates for cpp_neutral_benchmark/cpp_neutral_benchmark.cc * When rounding leads to a bad model, return DemographyError rather than ValueError * Update examples/plugin/test_plugin.py * Fix C++ tests that were incorrect. These had to be changed b/c of errors we discovered upstream in demes-forward.
molpopgen
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* Implement pickling for ForwardDemesGraph Python class. * ForwardDemesGraph now stores its demes.Graph * Pull in demes-rs dependencies from GitHub * remove some tests that rely on the deprecated API * Remove test decorator invoking DemographyDebugger * API updates for cpp_neutral_benchmark/cpp_neutral_benchmark.cc * When rounding leads to a bad model, return DemographyError rather than ValueError * Update examples/plugin/test_plugin.py * Fix C++ tests that were incorrect. These had to be changed b/c of errors we discovered upstream in demes-forward.
molpopgen
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Mar 10, 2023
* Implement pickling for ForwardDemesGraph Python class. * ForwardDemesGraph now stores its demes.Graph * Pull in demes-rs dependencies from GitHub * remove some tests that rely on the deprecated API * Remove test decorator invoking DemographyDebugger * API updates for cpp_neutral_benchmark/cpp_neutral_benchmark.cc * When rounding leads to a bad model, return DemographyError rather than ValueError * Update examples/plugin/test_plugin.py * Fix C++ tests that were incorrect. These had to be changed b/c of errors we discovered upstream in demes-forward.
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