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Moved "_z" output to "ocean_model_z" component
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- Until now, remapped diagnostics, known as "_z" output, has been indicated by
  an "_z" attached to some specific variable names.
- We now register these diagnostics in a component "ocean_model_z", instead of
  "ocean_model".
- The variable names in "ocean_model_z" can now be the same as in "ocean_model"
  so the "_z" has been removed from those variables.
- diag_tables had (have) to be updated.
- No answer changes.
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adcroft committed Sep 17, 2014
1 parent 75de060 commit c0fbf98
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Showing 23 changed files with 214 additions and 188 deletions.
18 changes: 9 additions & 9 deletions examples/coupled_AM2_LM3_SIS/AM2_MOM6i_1deg/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ CM2.2
"land_instant", 1, "months", 1, "days", "time",
"land_month", 1, "months", 1, "days", "time",
"ocean_month", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
#"ocean_scalar", 1, "months", 1, "days", "time"
#
#output variables
Expand Down Expand Up @@ -41,14 +41,14 @@ CM2.2

# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC11_z","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC12_z","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC11","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC12","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model","geolon","geolon","ocean_month_z","all",.false.,"none",2
"ocean_model","geolat","geolat","ocean_month_z","all",.false.,"none",2
"ocean_model","geolon_u","geolon_u","ocean_month_z","all",.false.,"none",2
Expand Down
18 changes: 9 additions & 9 deletions examples/coupled_AM2_LM3_SIS2/AM2_SIS2B_MOM6i_1deg/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ CM2.2
"land_instant", 1, "months", 1, "days", "time",
"land_month", 1, "months", 1, "days", "time",
"ocean_month", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
#"ocean_scalar", 1, "months", 1, "days", "time"
#
#output variables
Expand Down Expand Up @@ -41,14 +41,14 @@ CM2.2

# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC11_z","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC12_z","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC11","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC12","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model","geolon","geolon","ocean_month_z","all",.false.,"none",2
"ocean_model","geolat","geolat","ocean_month_z","all",.false.,"none",2
"ocean_model","geolon_u","geolon_u","ocean_month_z","all",.false.,"none",2
Expand Down
18 changes: 9 additions & 9 deletions examples/coupled_AM2_LM3_SIS2/AM2_SIS2_MOM6i_1deg/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ CM2.2
"land_instant", 1, "months", 1, "days", "time",
"land_month", 1, "months", 1, "days", "time",
"ocean_month", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
#"ocean_scalar", 1, "months", 1, "days", "time"
#
#output variables
Expand Down Expand Up @@ -41,14 +41,14 @@ CM2.2

# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC11_z","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC12_z","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC11","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC12","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model","geolon","geolon","ocean_month_z","all",.false.,"none",2
"ocean_model","geolat","geolat","ocean_month_z","all",.false.,"none",2
"ocean_model","geolon_u","geolon_u","ocean_month_z","all",.false.,"none",2
Expand Down
18 changes: 9 additions & 9 deletions examples/coupled_AM2_SIS/AM2_MOM6i_1deg/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ CM2.2
"land_instant", 1, "months", 1, "days", "time",
"land_month", 1, "months", 1, "days", "time",
"ocean_month", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
#"ocean_scalar", 1, "months", 1, "days", "time"
#
#output variables
Expand Down Expand Up @@ -41,14 +41,14 @@ CM2.2

# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC11_z","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC12_z","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC11","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC12","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model","geolon","geolon","ocean_month_z","all",.false.,"none",2
"ocean_model","geolat","geolat","ocean_month_z","all",.false.,"none",2
"ocean_model","geolon_u","geolon_u","ocean_month_z","all",.false.,"none",2
Expand Down
18 changes: 9 additions & 9 deletions examples/coupled_AM2_SIS/CM2G63L/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,7 @@ CM2G63L
"land_instant", 1, "months", 1, "days", "time",
"land_month", 1, "months", 1, "days", "time",
"ocean_month", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
"ocean_month_z", 1, "months", 1, "days", "time"
#"ocean_scalar", 1, "months", 1, "days", "time"
#
#output variables
Expand Down Expand Up @@ -41,14 +41,14 @@ CM2G63L

# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC11_z","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model","CFC12_z","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC11","CFC11","ocean_month_z","all",.true.,"none",2
"ocean_model_z","CFC12","CFC12","ocean_month_z","all",.true.,"none",2
"ocean_model","geolon","geolon","ocean_month_z","all",.false.,"none",2
"ocean_model","geolat","geolat","ocean_month_z","all",.false.,"none",2
"ocean_model","geolon_u","geolon_u","ocean_month_z","all",.false.,"none",2
Expand Down
28 changes: 16 additions & 12 deletions examples/ocean_SIS/GOLD_SIS/available_diags.000000
Original file line number Diff line number Diff line change
Expand Up @@ -443,24 +443,24 @@
"ocean_model", "col_height" [Unused]
! long_name: The height of the water column
! units: m
"ocean_model", "u_z" [Used]
"ocean_model_z", "u" [Used]
! long_name: Zonal Velocity in Depth Space
! units: meter second-1
"ocean_model", "uo_z" [Unused]
"ocean_model_z", "uo" [Unused]
! long_name: Sea Water X Velocity
! units: m s-1
! standard_name: sea_water_x_velocity
"ocean_model", "v_z" [Used]
"ocean_model_z", "v" [Used]
! long_name: Meridional Velocity in Depth Space
! units: meter second-1
"ocean_model", "vo_z" [Unused]
"ocean_model_z", "vo_z" [Unused]
! long_name: Sea Water Y Velocity
! units: m s-1
! standard_name: sea_water_y_velocity
"ocean_model", "uh_z" [Unused]
"ocean_model_z", "uh" [Unused]
! long_name: Zonal Volume Transport in Depth Space
! units: meter3 second-1
"ocean_model", "vh_z" [Unused]
"ocean_model_z", "vh" [Unused]
! long_name: Meridional Volume Transport in Depth Space
! units: meter3 second-1
"ocean_model", "ea" [Unused]
Expand Down Expand Up @@ -801,15 +801,19 @@
"ocean_model", "salt_predia" [Unused]
! long_name: Salinity
! units: PSU
"ocean_model", "temp_z" [Used]
"ocean_model_z", "temp" [Used]
! long_name: Potential Temperature
! units: degC
! standard_name: not provided
"ocean_model", "salt_z" [Used]
"ocean_model_z", "thetao" [Unused]
! long_name: Sea Water Potential Temperature
! units: C
! standard_name: sea_water_potential_temperature
"ocean_model_z", "salt" [Used]
! long_name: Salinity
! units: PSU
! standard_name: not provided
"ocean_model", "so_z" [Unused]
"ocean_model_z", "so" [Unused]
! long_name: Sea Water Salinity
! units: psu
! standard_name: sea_water_salinity
Expand All @@ -828,21 +832,21 @@
"ocean_model", "age_dfy" [Unused]
! long_name: Ideal Age Tracer diffusive zonal flux
! units: years m3 s-1
"ocean_model", "age_z" [Used]
"ocean_model_z", "age_z" [Unused]
! long_name: Ideal Age Tracer
! units: years
! standard_name: not provided
"ocean_model", "CFC11" [Unused]
! long_name: CFC-11 Concentration
! units: mol m-3
"ocean_model", "CFC11_z" [Unused]
"ocean_model_z", "CFC11_z" [Unused]
! long_name: CFC-11 Concentration
! units: mol m-3
! standard_name: not provided
"ocean_model", "CFC12" [Unused]
! long_name: CFC-12 Concentration
! units: mol m-3
"ocean_model", "CFC12_z" [Unused]
"ocean_model_z", "CFC12_z" [Unused]
! long_name: CFC-12 Concentration
! units: mol m-3
! standard_name: not provided
Expand Down
12 changes: 6 additions & 6 deletions examples/ocean_SIS/GOLD_SIS/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -46,12 +46,12 @@ GOLD_SIS
#
# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2

# Continuity Equation Terms:
#===========================
Expand Down
16 changes: 8 additions & 8 deletions examples/ocean_SIS/GOLD_SIS_025/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -27,14 +27,14 @@ HiRes_025_SIS_1440
"ocean_model","salt","salt","ocean_month","all",.false.,"none",2
"ocean_model","vintage","vintage","ocean_month","all",.false.,"none",2
"ocean_model","age","age","ocean_month","all",.false.,"none",2
"ocean_model","u_z","u","ocean_month_z","all",.false.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.false.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.false.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.false.,"none",2
"ocean_model","vintage_z","vintage","ocean_month_z","all",.false.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.false.,"none",2
#"ocean_model","uh_z","uh","ocean_month_z","all",.false.,"none",2
#"ocean_model","vh_z","vh","ocean_month_z","all",.false.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.false.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.false.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.false.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.false.,"none",2
"ocean_model_z","vintage","vintage","ocean_month_z","all",.false.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.false.,"none",2
#"ocean_model_z","uh","uh","ocean_month_z","all",.false.,"none",2
#"ocean_model_z","vh","vh","ocean_month_z","all",.false.,"none",2
"ocean_model","SSH","ssh","ocean_daily","all",.false.,"none",2
"ocean_model","SSU","ssu","ocean_daily","all",.false.,"none",2
"ocean_model","SSV","ssv","ocean_daily","all",.false.,"none",2
Expand Down
12 changes: 6 additions & 6 deletions examples/ocean_SIS/GOLD_SIS_icebergs/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -47,12 +47,12 @@ GOLD_SIS
#
# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_day_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_day_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_day_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_day_z","all",.true.,"none",2
#"ocean_model","vintage_z","vintage","ocean_day_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_day_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_day_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_day_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_day_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_day_z","all",.true.,"none",2
#"ocean_model_z","vintage","vintage","ocean_day_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_day_z","all",.true.,"none",2

# Continuity Equation Terms:
#===========================
Expand Down
24 changes: 14 additions & 10 deletions examples/ocean_SIS/OM4_025/available_diags.000000
Original file line number Diff line number Diff line change
Expand Up @@ -401,24 +401,24 @@
"ocean_model", "col_height" [Unused]
! long_name: The height of the water column
! units: m
"ocean_model", "u_z" [Unused]
"ocean_model_z", "u" [Unused]
! long_name: Zonal Velocity in Depth Space
! units: meter second-1
"ocean_model", "uo_z" [Unused]
"ocean_model_z", "uo" [Unused]
! long_name: Sea Water X Velocity
! units: m s-1
! standard_name: sea_water_x_velocity
"ocean_model", "v_z" [Unused]
"ocean_model_z", "v" [Unused]
! long_name: Meridional Velocity in Depth Space
! units: meter second-1
"ocean_model", "vo_z" [Unused]
"ocean_model_z", "vo_z" [Unused]
! long_name: Sea Water Y Velocity
! units: m s-1
! standard_name: sea_water_y_velocity
"ocean_model", "uh_z" [Unused]
"ocean_model_z", "uh" [Unused]
! long_name: Zonal Volume Transport in Depth Space
! units: meter3 second-1
"ocean_model", "vh_z" [Unused]
"ocean_model_z", "vh" [Unused]
! long_name: Meridional Volume Transport in Depth Space
! units: meter3 second-1
"ocean_model", "ea" [Unused]
Expand Down Expand Up @@ -789,15 +789,19 @@
"ocean_model", "salt_predia" [Unused]
! long_name: Salinity
! units: PSU
"ocean_model", "temp_z" [Unused]
"ocean_model_z", "temp" [Unused]
! long_name: Potential Temperature
! units: degC
! standard_name: not provided
"ocean_model", "salt_z" [Unused]
"ocean_model_z", "thetao" [Unused]
! long_name: Sea Water Potential Temperature
! units: C
! standard_name: sea_water_potential_temperature
"ocean_model_z", "salt" [Unused]
! long_name: Salinity
! units: PSU
! standard_name: not provided
"ocean_model", "so_z" [Unused]
"ocean_model_z", "so" [Unused]
! long_name: Sea Water Salinity
! units: psu
! standard_name: sea_water_salinity
Expand All @@ -816,7 +820,7 @@
"ocean_model", "age_dfy" [Unused]
! long_name: Ideal Age Tracer diffusive zonal flux
! units: years m3 s-1
"ocean_model", "age_z" [Unused]
"ocean_model_z", "age_z" [Unused]
! long_name: Ideal Age Tracer
! units: years
! standard_name: not provided
Expand Down
12 changes: 6 additions & 6 deletions examples/ocean_SIS2/Baltic/diag_table
Original file line number Diff line number Diff line change
Expand Up @@ -46,12 +46,12 @@ GOLD_SIS
#
# Z-space fields:
#==================
"ocean_model","u_z","u","ocean_month_z","all",.true.,"none",2
"ocean_model","v_z","v","ocean_month_z","all",.true.,"none",2
"ocean_model","temp_z","temp","ocean_month_z","all",.true.,"none",2
"ocean_model","salt_z","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model","vintage_z","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model","age_z","age","ocean_month_z","all",.true.,"none",2
"ocean_model_z","u","u","ocean_month_z","all",.true.,"none",2
"ocean_model_z","v","v","ocean_month_z","all",.true.,"none",2
"ocean_model_z","temp","temp","ocean_month_z","all",.true.,"none",2
"ocean_model_z","salt","salt","ocean_month_z","all",.true.,"none",2
#"ocean_model_z","vintage","vintage","ocean_month_z","all",.true.,"none",2
"ocean_model_z","age","age","ocean_month_z","all",.true.,"none",2

# Continuity Equation Terms:
#===========================
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