Skip to content
This repository has been archived by the owner on Oct 15, 2021. It is now read-only.

Add basic form-based disease-phenotype entry #2

Closed
cmungall opened this issue Jan 16, 2015 · 1 comment
Closed

Add basic form-based disease-phenotype entry #2

cmungall opened this issue Jan 16, 2015 · 1 comment
Assignees
Labels

Comments

@cmungall
Copy link
Member

First pass should have 3 fields:

  1. Disease
  2. Phenotype
  3. Publication

(To make things simpler, as a very first pass, omit 3.)

  1. The value of 1 should be anything from the disease ontology (D)
  2. The value of 2 should be anything from the phenotype ontology (Ph)
  3. The value of 3 will at first pass be a string (first pass) (Pub)

This should map to a graph in the following way:

  • generate IRI for disease instance, di
  • generate IRI for phenotype instance, pi
  • create 3 triples
    • di rdf:type D
    • pi rdf:type Ph
    • di RO_0002200 pi

Check with @hdietze for modeling of Pub

@cmungall cmungall changed the title Add basic form-based phenotype entry Add basic form-based disease-phenotype entry Jul 28, 2015
@cmungall cmungall added the forms label Jul 28, 2015
@DoctorBud
Copy link
Contributor

I think this ticket became closable when the original WebPhenote work was performed, and is perhaps superseded by #17, which is blocked on the review of two PRs (Noctua and bbop-client-barista).

Sign up for free to subscribe to this conversation on GitHub. Already have an account? Sign in.
Labels
Projects
None yet
Development

No branches or pull requests

3 participants