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add draw_molecule.rst
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mori0711 committed Feb 15, 2020
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21 changes: 21 additions & 0 deletions docs/usage/make_molecular_parameter/draw_molecule.rst
Expand Up @@ -97,3 +97,24 @@ users have to set "0".
| :align: center |
+--------------------------------------------------------------------------+

- Whether to evaluate atomic charges by ab initio calculation.
If users want to select the estimated atomic charge by ab initio calculation, users select this option.
Also, users have to select the method, basis function and charge densith of method.
ESP is the electrostatic potential fitting method. Mulliken is Mulliken density analysis.

+--------------------------------------------------------------------------+
| .. image:: ./imgs/draw_molecule_009.png |
| :scale: 80 % |
| :align: center |
+--------------------------------------------------------------------------+

Step5,Input the registrated e-mail address.
After PolyParGen makes the moleculer parameter, the molecule's parameter files are sent to the registrated e-mail address.
Users have to input your e-mail.

+--------------------------------------------------------------------------+
| .. image:: ./imgs/draw_molecule_011.png |
| :scale: 80 % |
| :align: center |
+--------------------------------------------------------------------------+

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