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TALON v5.0
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@dewyman dewyman released this 20 Mar 04:15
· 98 commits to master since this release
v5.0
d481546
  • Added talon_label_reads module to look for evidence of internal priming
  • Overhauled filtering step to add additional options and to take internal priming into account
  • TALON schema version 5:
    • Added fields to observed table to record custom SAM tags
    • Removed reference to nonexistent exon table
    • Added schema version field to run_info
  • ISM transcripts with known start and ends are no longer promoted to NICs.
  • Accommodate more GTF formatting quirks
  • Replaced GM12878 example with SIRVs for speed and simplicity
  • Changed default identity parameter value to 0.8 (talon)
  • Changed default min length parameter value to 0 (talon_initialize_database)
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