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Fairlie Reese edited this page Jun 4, 2020 · 2 revisions

Swan

swan_logo Swan is a Python library designed for the analysis and visualization of transcriptomes, especially with long-read transcriptomes in mind. Users can merge transcriptomes from different datasets and explore transcript models distict splicing and expression patterns across datasets.

Installation

Swan can be installed directly from PyPi. Run pip install swan_vis to install Swan's most recent release. Alternatively, the most recent commits can be installed by git cloning this repo and running pip install . in the downloaded directory.

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