Fixs bug with Linux version make.file

find system command requires maxdepth to come before name option. Mac and Windows don't care.
mothur · Jul 27, 2015 · cd70dde · cd70dde
1 parent fa82f27
commit cd70dde
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/source/commands/makefilecommand.cpp b/source/commands/makefilecommand.cpp
@@ -133,7 +133,7 @@ int MakeFileCommand::execute(){
 
         //find all .fastq files
         string tempFile = inputDir + "fileList.temp";
-        string findCommand = "find \"" + inputDir.substr(0, inputDir.length()-1) + "\" -name \"*." + typeFile + "\" -maxdepth 1 > \"" + tempFile + "\"";
+        string findCommand = "find \"" + inputDir.substr(0, inputDir.length()-1) + "\" -maxdepth 1 -name \"*." + typeFile + "\"  > \"" + tempFile + "\"";
         system(findCommand.c_str());
 
         //read in list of files