Add abstract to TestDocument

test/TestDocument/abstract.html

@@ -0,0 +1 @@
+<div>An abstract.</div>

test/TestDocument/figures/scatterplot/caption.html

@@ -1 +1 @@
-<div data-label="286335">A scatterplot by By DanielPenfield - Own work, CC BY-SA 3.0, <a href="https://commons.wikimedia.org/w/index.php?curid=9402369">https://commons.wikimedia.org/w/index.php?curid=9402369</a>.</div>
+<div data-label="286335">A scatterplot by By DanielPenfield - Own work, CC BY-SA 3.0, <a href="https://commons.wikimedia.org/w/index.php?curid=9402369">https://commons.wikimedia.org/w/index.php?curid=9402369</a>.</div>

test/TestDocument/full_article.tex

@@ -0,0 +1,189 @@
+\documentclass[10pt]{article}
+
+\usepackage{fullpage}
+\usepackage{setspace}
+\usepackage{parskip}
+\usepackage{titlesec}
+\usepackage{placeins}
+\usepackage{xcolor}
+\usepackage{lineno}
+
+
+
+
+
+\PassOptionsToPackage{hyphens}{url}
+\usepackage[colorlinks = true,
+            linkcolor = blue,
+            urlcolor  = blue,
+            citecolor = blue,
+            anchorcolor = blue]{hyperref}
+\usepackage{etoolbox}
+\makeatletter
+\patchcmd\@combinedblfloats{\box\@outputbox}{\unvbox\@outputbox}{}{%
+  \errmessage{\noexpand\@combinedblfloats could not be patched}%
+}%
+\makeatother
+
+
+\usepackage{natbib}
+
+
+
+
+\renewenvironment{abstract}
+  {{\bfseries\noindent{\abstractname}\par\nobreak}\footnotesize}
+  {\bigskip}
+
+\renewenvironment{quote}
+  {\begin{tabular}{|p{13cm}}}
+  {\end{tabular}}
+
+\titlespacing{\section}{0pt}{*3}{*1}
+\titlespacing{\subsection}{0pt}{*2}{*0.5}
+\titlespacing{\subsubsection}{0pt}{*1.5}{0pt}
+
+
+\usepackage{authblk}
+
+
+\usepackage{graphicx}
+\usepackage[space]{grffile}
+\usepackage{latexsym}
+\usepackage{textcomp}
+\usepackage{longtable}
+\usepackage{tabulary}
+\usepackage{booktabs,array,multirow}
+\usepackage{amsfonts,amsmath,amssymb}
+\providecommand\citet{\cite}
+\providecommand\citep{\cite}
+\providecommand\citealt{\cite}
+% You can conditionalize code for latexml or normal latex using this.
+\newif\iflatexml\latexmlfalse
+\providecommand{\tightlist}{\setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}%
+
+\AtBeginDocument{\DeclareGraphicsExtensions{.pdf,.PDF,.eps,.EPS,.png,.PNG,.tif,.TIF,.jpg,.JPG,.jpeg,.JPEG}}
+
+\usepackage[utf8]{inputenc}
+\usepackage[english]{babel}
+
+
+
+
+
+
+% Edit this header.tex file to include frontmatter definitions and global macros
+
+% Add here any LaTeX packages you would like to load in all document blocks
+% \usepackage{xspace}
+\usepackage{authblk}
+
+\author[1]{Mark Juers}
+\affil[1]{Indiana University}
+% Add here any LaTeX macros you would like to load in all document blocks
+% \def\example{This is an example macro.}
+\setcounter{secnumdepth}{2}
+
+
+% -----
+
+\iflatexml
+% Add here any LaTeXML-specific commands
+
+% -----
+
+\else
+% Add here any export style-specific LaTeX commands. These will only be loaded upon document export. 
+% \paperfield{Subject domain of my document}
+% \keywords{keyword1, keyword2}
+% \corraddress{Author One PhD, Department, Institution, City, State or Province, Postal Code, Country}
+% \fundinginfo{Funder One, Funder One Department, Grant/Award Number: 123456.}
+\fi
+
+
+\begin{document}
+
+\title{Test document}
+
+
+
+\author[1]{Mark Juers}%
+\affil[1]{Affiliation not available}%
+
+
+\vspace{-1em}
+
+
+
+  \date{\today}
+
+
+\begingroup
+\let\center\flushleft
+\let\endcenter\endflushleft
+\maketitle
+\endgroup
+
+
+
+
+
+\selectlanguage{english}
+\begin{abstract}
+An abstract.%
+\end{abstract}%
+
+
+
+
+\section*{A heading}
+
+{\label{850151}}
+
+\subsection*{Another heading}
+
+{\label{367935}}
+
+\hyperref[csl:1]{(Ebert, 2013)}
+
+\hyperref[csl:1]{(Ebert, 2013)}
+
+\hyperref[csl:1]{(Ebert, 2013)}
+
+Figure {\ref{286335}}
+
+Eq~{\ref{eq:eq1}}
+
+An inline equation:~\(\int_0^xf\left(t\right)\mathrm{d}t\). And a display equation.
+
+\begin{equation}
+\label{eq:eq1}
+\int_0^x f(t) \mathrm{d}t
+\end{equation}
+
+Some troublesome dollar signs: \$100, \$200, \$300
+
+Section~{\ref{850151}}
+
+\section*{Some markdown}\label{some-markdown}
+
+Once, there was a cuttlefish, who we'll call \emph{Sepia apama}. Now,
+some math: \(a + b = c\).\selectlanguage{english}
+\begin{figure}[h!]
+\begin{center}
+\includegraphics[width=0.70\columnwidth]{figures/scatterplot/scatterplot}
+\caption{{A scatterplot by By DanielPenfield - Own work, CC BY-SA 3.0,
+\url{https://commons.wikimedia.org/w/index.php?curid=9402369}.
+{\label{286335}}%
+}}
+\end{center}
+\end{figure}
+
+\selectlanguage{english}
+\FloatBarrier
+\section*{References}\sloppy
+\phantomsection
+\label{csl:1}Ebert, D. (2013). {The epidemiology and evolution of symbionts with mixed-mode transmission}. \textit{Annual Review of Ecology, Evolution, and Systematics}, \textit{44}(1), 623–643. \url{https://doi.org/10.1146/annurev-ecolsys-032513-100555}
+
+\end{document}
+

test/TestDocument/layout.md

@@ -1,3 +1,4 @@
+abstract.html
 untitled.html
 li1fpi8krbo.html
 rtdm09a2c6g.tex

test/TestDocument/rtdm09a2c6g.tex

@@ -1,4 +1,4 @@
 \begin{equation}
 \label{eq:eq1}
 \int_0^x f(t) \mathrm{d}t
-\end{equation}
+\end{equation}

test/TestDocument/untitled.html

@@ -1 +1 @@
-<h1 data-label="850151" class="ltx_title_section">A heading</h1><h2 data-label="367935" class="ltx_title_subsection">Another heading</h2><div><cite class="ltx_cite raw v1">\cite{ebert_epidemiology_2013}</cite></div><div><cite class="ltx_cite raw v1">\citet{ebert_epidemiology_2013}</cite></div><div><cite class="ltx_cite raw v1">\citep[see][]{ebert_epidemiology_2013}</cite></div><div>Figure <span class="au-ref raw v1">\ref{286335}</span></div><div>Eq&nbsp;<span class="au-ref raw v1">\ref{eq:eq1}</span></div>
+<h1 data-label="850151" class="ltx_title_section">A heading</h1><h2 data-label="367935" class="ltx_title_subsection">Another heading</h2><div><cite class="ltx_cite raw v1">\cite{ebert_epidemiology_2013}</cite></div><div><cite class="ltx_cite raw v1">\citet{ebert_epidemiology_2013}</cite></div><div><cite class="ltx_cite raw v1">\citep[see][]{ebert_epidemiology_2013}</cite></div><div>Figure <span class="au-ref raw v1">\ref{286335}</span></div><div>Eq&nbsp;<span class="au-ref raw v1">\ref{eq:eq1}</span></div>