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two more weeks; fix URL to scidap workflow
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.. post:: 2015-11-11 | ||
:tags: weekly-update | ||
:author: me | ||
:location: Cluj | ||
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**************************************** | ||
Weekly report for the week of 2015-10-26 | ||
**************************************** | ||
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This is the second weekly update on what I've been doing for the CWL; it covers | ||
the week of 2015-10-26. | ||
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Summary: logistics, Code of Conduct draft public, | ||
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Sunday 2015-10-25 | ||
----------------- | ||
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- Reserved rental car for Davis/San Mateo/Santa Clara legs | ||
- Requested hotel reservation information for Austin leg | ||
- Booked AirBNB room for Boston leg | ||
- Schedule first check-in meeting with Brandi | ||
- Confirmed dates for a colleague of a colleague to stay in my Davis apartment | ||
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Monday 2015-10-26 | ||
----------------- | ||
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- Read through every GitHub issue from non-core team people, adding responses | ||
and labels as I went | ||
- Finished my NSF funding opportunities education for now; subscribed to learn | ||
about future opportunities | ||
- Sent out reminder about CWL video meeting & daylight savings mismatch between | ||
Europe and US | ||
- Fixed typo in GitHub repository as reported by Chris Fields | ||
- Wrote up notes from last week and sent them out | ||
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Tuesday 2015-10-27 | ||
------------------ | ||
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- Reviewed Code of Conduct options again, made pull request to take the | ||
conversation public as requested by the leadership team | ||
- Reviewed and merged | ||
https://github.com/common-workflow-language/common-workflow-language/pull/152 | ||
- Ran regular CWL group video chat, our largest yet with 17 participants! | ||
- Next meeting will be on November 10th. | ||
- Sent out location & remote participation guidance | ||
- Took notes at the meeting: https://docs.google.com/document/d/1wZN0m2Vu4Cpqhd50HgcxJG_fxI4034qBWTZxRn1kbCw/edit?usp=sharing | ||
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Wednesday 2015-10-28 | ||
-------------------- | ||
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- Bi-weekly meeting with Brand Davis-Dusenbery | ||
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- Lawyers advised that non-profits seeking 501(3)c status involving | ||
free/open-source software and whose donors are on the board have had many | ||
troubles getting approved due to lack of separation. I agreed to chat with | ||
both NumFOCUS & the Software Freedom Conservatory about fiscal sponsorship. | ||
- Brandi agreed to be the escalation contact for potential (though not | ||
expected) CoC violations by Nebojša. | ||
- Scheduled meeting at SBG prior to conversation at the Broad about their | ||
Workflow Description Language on Nov 13th. | ||
- I enquired about recording/broadcasting the Festival of Genomics workshop; | ||
Brandi will followup. | ||
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- Made a logo: http://logomakr.com/2xjnRU implemented a favicon using | ||
http://www.favicomatic.com/done | ||
- Setup Hangouts on Air streaming which required creating a YouTube channel, G+ | ||
page, and several verifications. | ||
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Thursday 2015-10-29 | ||
------------------- | ||
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- Travel day: CLJ-OTP-AMS-MSP-SMF | ||
- Voiced my support for keeping a '--dry-run' option to cwltool | ||
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Friday 2015-10-30 | ||
----------------- | ||
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- Attended an excellent workshop, "Software for Science: Getting Credit for Code" | ||
#SoftCiteUCD http://icis.ucdavis.edu/?p=790 | ||
- Had great conversations with Louise Kellogg of the Computational Infrastructure | ||
for Geosciences group. https://geodynamics.org/cig/about/ | ||
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Saturday 2015-11-01 | ||
------------------- | ||
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- Whoops, sublet for my apartment fell through. Gave away most everything I | ||
could and moved my things to storage. |
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.. post:: 2015-11-11 | ||
:tags: weekly-update | ||
:author: me | ||
:location: Cluj | ||
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**************************************** | ||
Weekly report for the week of 2015-11-05 | ||
**************************************** | ||
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This is the third weekly update on what I've been doing for the CWL; it covers | ||
the week of 2015-11-05. | ||
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Summary: FoG Workshop & Dev summit were a huge success! | ||
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Monday 2015-11-05 | ||
----------------- | ||
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- Dealt with fallout from my sublet falling through | ||
- Drove to San Mateo | ||
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Tuesday 2015-11-06 | ||
------------------ | ||
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- CWL Workshop at the Festival of Genomics, California | ||
- Well over 50 participants! | ||
- Had many great conversations including one with Matt Bookman of the Google | ||
Cloud team. He is working with ISB on their CWL-on-Kubernetes development. | ||
- Sketched out how to use the "streamable" flag to optimize use of object | ||
stores such as Google Cloud Storage. Discussed using the GCS FUSE adapter | ||
instead of using GCS URIs in CWL documents. A complete win for that design | ||
decision. | ||
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Wednesday 2015-11-07 | ||
-------------------- | ||
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- CWL Codefest | ||
- Was really more of a core team summit | ||
- Lots of useful discussion on draft 3 features. Notes are at: | ||
https://drive.google.com/open?id=1AXMDv7Zy7D68XbbGjv4pIKw69H31_gfYn5Hk6RGl--M | ||
- Undecided issues: specifiying how to satisfy tool dependencies without using | ||
Docker | ||
- Drove back to Davis | ||
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Thursday 2015-11-08 | ||
------------------- | ||
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- Finished moving out of my apartment. Missed my flight to Austin by mere | ||
minutes. | ||
- Read ansible documentation | ||
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Friday 2015-11-09 | ||
----------------- | ||
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- Got up at 03:30 for my rescheduled flight to Austin; second leg was canceled, | ||
"bonus" 10-hour layover | ||
- talk prep for TACC | ||
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To do | ||
----- | ||
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- Get `Andrey Kartashov's recently contributed workflows | ||
<https://github.com/common-workflow-language/workflows/tree/master/workflows/scidap>`_ | ||
running for myself. | ||
- Setup Jenkins CI server to test CWL conformance | ||
- Start the sustainability review. | ||
- Start an ontological comparison between the semantics of CWL tool and | ||
workflow descriptions and `the other known efforts | ||
<https://github.com/common-workflow-language/common-workflow-language/wiki/Existing-Workflow-systems>`_. | ||
- Follow up with the Software Freedom Conservancy and NumFOCUS. | ||
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