Merge pull request #14 from mrc-ide/feature/tutorials

final changes to move to version 1.1.0
mrc-ide · Dec 12, 2023 · 735f493 · 735f493
2 parents 92c4d92 + ddccfb6
commit 735f493
Show file tree

Hide file tree

Showing 62 changed files with 88 additions and 94 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: MIPanalyzer
 Type: Package
 Title: Filtering and analysis of MIP data
-Version: 1.0.0
+Version: 1.1.0
 Authors@R: as.person(c(
     "Bob Verity <r.verity@imperial.ac.uk> [aut, cre]"
   ))

diff --git a/README.Rmd b/README.Rmd
@@ -10,7 +10,6 @@ knitr::opts_chunk$set(
 ```
 
 <!-- badges: start -->
-[![Project Status: WIP – Initial development is in progress, but there has not yet been a stable, usable release suitable for the public.](https://www.repostatus.org/badges/latest/wip.svg)](https://www.repostatus.org/#wip)
 [![develop checks](https://github.com/mrc-ide/PlasmoSim/workflows/checks_develop/badge.svg)](https://github.com/mrc-ide/PlasmoSim/actions)
 [![master checks](https://github.com/mrc-ide/PlasmoSim/workflows/checks_master/badge.svg)](https://github.com/mrc-ide/PlasmoSim/actions)
 <!-- badges: end -->
@@ -30,9 +29,7 @@ All documentation, including installation instructions and tutorials, are on [th
 Version History
 ------------
 
-The software is current still in beta. Some functionality may be untested.
-
-The current version of the software is v1.0.0, released 17 Dec 2019.
+The current release version of the software is v1.1.0, released 12 Dec 2023.
 
 
 Contributors

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/articles/filtering_data.html b/docs/articles/filtering_data.html
diff --git a/docs/articles/genetic_distances.html b/docs/articles/genetic_distances.html
diff --git a/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-6-1.png b/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-6-1.png
diff --git a/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-8-1.png b/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-8-1.png
diff --git a/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-9-1.png b/docs/articles/genetic_distances_files/figure-html/unnamed-chunk-9-1.png
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/articles/installation.html b/docs/articles/installation.html
diff --git a/docs/articles/structure_analysis.html b/docs/articles/structure_analysis.html
diff --git a/docs/authors.html b/docs/authors.html