The HBV model developed at Imperial College London, as described in the paper "The impact of the timely birth dose vaccine on the global elimination of hepatitis B".
All of the scripts were run in MATLAB (version R2020b).
In the folder src, the folder analysis contains the scripts to run.
main_script.m runs country_level_analyses.m, which in turn runs HBVmodel.m (the latter is in the folder model), to generate 800 results files containing results for each country.
summarize_stochastic_runs.m summarizes the results from the 800 results files into results for each country, each WHO region, as well as global results.
draw_figures.m draws Figures 1e–1f, 2a–2d, 3a, 3b, 4a–4b, 5a–5b, Supplementary figures 1, 2a–2b and 3 and Supplementary Tables 3 and 4 (default analyses). Data structures for running this code can be downloaded from the Dropbox folder https://www.dropbox.com/sh/veie946cwcl4y4m/AAA7X22L22cvqTC-tcm4HzJga?dl=0 and put into the folder outputs.
The folder data_and_script_for_figures contains the script draw_figs.m for drawing Figures 1f, 2b, 3a, 3b, 4a–4b, 5a–5b, Supplementary Figures 1, 2b and 3 and Supplementary Tables 3 and 4 (default analyses). The data structure for running this code can be downloaded from the Dropbox folder https://www.dropbox.com/sh/veie946cwcl4y4m/AAA7X22L22cvqTC-tcm4HzJga?dl=0 and put into the folder data_and_script_for_figures.