safir2 is an upgraded and refactored version of safir, which implements a stochastic individual based model of SARS-CoV-2 transmission. The model takes into account individual level immunity and neutralizing antibody titre, as well as allowing for complex vaccine allocation schemes. It uses individual to specify and run the simulation model.
remotes::install_github('mrc-ide/safir2')
library(safir2)MIT © Imperial College of Science, Technology and Medicine